barSeed - Barley Seed Development Database

Probe ABC08175

Source Contig ABC08175

barSeed

Links

Affymetrix Source Sequence (1187 bp)

>ABC08175 1187
GCTCCTCCTCCCAGATCTCGCACCACACGGCCGCGCGCACCGGAGACACCTAGCGAGACG
GTTGCGAGAGGTAAAACAGCAAAAGAGAAGAGGCCACCGCAGCTCGCGTACCGGCGGTGT
GTGGGTGGCGGCGTCCGTCACGCGTCGGTGTATCGGGTGATGGACGCTGGCGGCGGGGGC
CTAGGCGGGTTCCAGTGGACCGCGGAGGAGGCCTCGACGATCGGGGGCATCGCGACGGTG
TCGCTGCTGCACTCCTTCATCCCCACGCACTGGCTCCCTTTCTCCATCGTTGGGCGCGCC
CAGCGCTGGCCGCTCTCCCGCACCCTCCTCGTCACTGCCTTTGGAGCCGTCCTTCATGTT
GTATCGACCGCTCTTCTAGGGATAACTGCAGTTACTATGGCAAATACTATAGCGGGCGAG
GAAACAGTGCATAAACTTGCCTCGCTGTTGCTAATATTTCTTGGAGCAGGTTACATTCTG
TTGTTTGTGTTAGGAAAAGGGGGTCATAGCCATGCTCATAATCATCCAATGGAGAAGATG
GCAGTCGCTGGTCTTGTACTTGTACCAGCATTATCACCCTGTGCAACTACTCTTCCAGTG
TTTCTTGCTGTTGGCAACTCATCCTCGATGATGTTTCTTGCAATCATTGTACTTCTCTTC
AGTACCATCACAGTGATGACGTCCCTGGTGGCCCTCTCATTTTATGGTGCTAGCCAGATC
AAGTTTCACTGGGTGGAACGCTATGACAAGGTCCTAGTTGGCTCGGTGCTGTGCCTTGTT
GGGGTTCTGACATATGTGTTCCATCACCATGATGGTGACCAGCATTCTCTCCATGCACAC
GTGCATAGGAAACTTGTGGGTTCTTGAGAGGAATATAAATAGATGGCAAATGAAGTTCCC
TAAGTTCACTATGAAACAAATTGTCTCTTGTCATCTAACTTTTGTACGTTATTTGCTGTA
CAAGATCTGATTATCAATTGATTTGTTGGGAATCTACCAACCTCTAGATTTCCTAGGAAT
ACAGACCAGGTGAATATTTACTGGAAATTATTTTTACCAGGGATCTTTGTTTGTGCTGAT
GCAGTTTAACTGGAACAGAGGGGTTTCAACTTGAGCCATTGGTGCCAAGCTAGTTAAAAT
TTCTGGATTTTTTGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK366157	1098	0.0	42 - 1098	100	1057 / 1057	None	ABC08175
MLOC_834.2	964	0.0	1 - 811	100	811 / 811	CUST_1024_PI390587928	ABC08175
MLOC_834.1	706	0.0	134 - 633	100	500 / 500	CUST_25780_PI390587928	ABC08175
MLOC_39408.1	516	9e-175	158 - 490	100	333 / 333	None	ABC08175
MLOC_834.3	492	5e-172	12 - 339	100	328 / 328	CUST_1024_PI390587928	ABC08175