barSeed - Barley Seed Development Database

Probe ABC08070

Source Contig ABC08070

barSeed

Links

Affymetrix Source Sequence (1120 bp)

>ABC08070 1120
CCGAGCAAGCACAGTACATCAGCGTCGTCGACGTCGACCACCATCGAGCCGTACTCCATG
GCCGCCGTGACCACCGCCTCCCTCTGCCCGGGCCTCGGCAAGACCCAACGAGGCCACGCG
AAGCCGCCGAGAACAACGGTCTGCCATTGCCTCCCTGCTCGGAGGACGGAGGAGGGGGTG
AAGCGGCGGGACGCCCTGCTCGGCGTCCTCCTCTCCGCTACCGCCGCGTCGTCGGCGCCA
CTGCTCGTCCCCGCCGAGGCTTTCGCCGAGGCCGCCGAGGCGCAGGAGGGGTTCACCGCG
TACGAGGATGAGGCCAACAAGTTCACCCTCGCGATTCCACAAGGCTGGCAGGTCGGCGCA
GGTGAACGCAGCGGCTTCAAGAACGTGACGGCGTTCTTCCCCGAGCAAAACCCCAACTCG
AGTGTCAGCGTCGTGATCACCGGAATCGGGCCAGACTTCACCAGCCTCAAGTCCTTCGGT
AATGTCGACGAGTTCGCCGAGAACCTGGTGACAGGCCTGGACAGGAGCTGGCAGCGGCCG
GCGGGGCTCACCGCGAAGCTCATCGACTCCAAGGCAGCAAACGGTCTCTACTACATCGAG
TACACGCTGCAGAACCCCGGCGAGAAGCGCCGCCACATCGTGTCCGCCATCGGGATGGCG
TTCAACGGCTGGTACAACCGGCTCTACACGGTGACAGGACAGTACATCGATGACGACGAG
GATTCAGCCATATACAAGCCTGAGATAGAGAAGTCTGTCAAGTCTTTCAAGTTCACATGA
AATGCCTCCAAAAAGGAAGTTCAGGTGAGAACAAGTATAGAGGAACAGAGAAGAGAAAGT
ATACAAAACTGGTAGCTCTTCATGTTAAGTTCAATTAGTGAGTGTGTATATGTTTGTCGA
ATTTACCGGAAGAAAATATGAACACCAAATGTTCAAAGACTTCGATGGCGTTGCTTGGCT
GAGGACAGCAATGGCAGCATGAGGGTATGAGATAGAGCATGAGAATGTCGTTTGTTCTGA
GAACATTGCTAGAACTCCTTATAAGAAACTAAAATTGCTCCGATGTAAACTTCTTCCTAG
CATCTATTTTTGGGCTCACATGTCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK364507	3509	0.0	1537 - 2599	100	1063 / 1063	CUST_32984_PI390587928	ABC04118 ABC06326 ABC08070
AK357144	1147	0.0	86 - 1147	100	1062 / 1062	None	ABC08070
AK368438	1053	0.0	2 - 1053	100	1052 / 1052	None	ABC08070
AK371373	1044	3e-60	78 - 204	100	127 / 127	None	ABC08070
MLOC_16963.1	641	0.0	141 - 641	100	501 / 501	None	ABC08070
MLOC_11472.1	587	0.0	95 - 587	100	493 / 493	None	ABC08070
MLOC_16963.2	623	9e-115	399 - 623	100	225 / 225	None	ABC08070