barSeed - Barley Seed Development Database

Probe ABC07813

Source Contig ABC07813

barSeed

Links

Affymetrix Source Sequence (1127 bp)

>ABC07813 1127
GTCCCCCGGCTGCAGGAATTCGCACGAGGCTCCAAACCCTCCCAACACAGCCCAACAAAG
AGGAAGCGAGAGCCGCCACGATGCAGCAAGCGATGCCCATGCCGCCGGCGGCGGCGGCGC
CTGGGATGCCTCCTTCTGCCGGCCTCAGCACCGAGCAGATCCAAAAGTACCTGGATGAAA
ATAAACAACTAATTTTGGCTATCTTGGAAAATCAGAACCTGGGAAAGTTGGCGGAATGTG
CTCAGTATCAAGCTCAGCTTCAGAAGAATCTTTTGTATTTGGCTGCGATTGCTGATACTC
AGCCACAGACCTCTGTAAGCCGTCCTCAGATGGCACCACCTGCTGCATCCCCAGGGGCAG
GGCATTACATGTCACAGGTGCCAATGTTCCCTCCGAGGACCCCTCTAACGCCTCAGCAGA
TGCAGGAGCAGCAACTACAGCAACAACAGGCTCAGATGCTTCCGTTTGCTGGTCAAATGG
TTGCGAGACCCGGGGCTGTCAATGGCATTCCCCAGGCCCCTCAAGTTGAACAACCAGCCT
ATGCAGCAGGTGGGGCCAGTTCCGAGCCTTCTGGCACCGAGAGCCACAGGAGCACTGGCG
CCGATAACGATGGTGGGAGCGGCTTGGCTGACCAGTCCTAAGAAAGCTACGAGCTTGCGT
TTTAGGTCGCAGAATGCATGTATACTAGCACCCGGACAAACAGAGGATCATTCCTGTGCC
CTTGAATGATAAGTGGCCGTGATCTTGGCGTGGATGATGAAGAGTAGTAGCTGTTATGCT
TGCCTTGGCTTTACCGATTACAACAGACGTAGATTATTATCATCTGTGCTGTGCTTGACT
TTCTGCATTTTATCATAGGTCTTGTATCCAGTTTACATGGAATAATAGGTCCCAGTTGTT
TGTTCCTCGTGATGGTTGTTGTCTGTCAACTAGACTAGTGTACAATCCTGAAATGGTGGT
AAGATGTTTTTTCTCCAGCAGTTGTTGCTAAGTTGCGTTGGTTGGTGTTGAAGTAGCATA
TAATTTTCCAATTAAAGGATGTTTCATTTGTCTTGTGAATCCTGATTATTTTAGCGGGAT
CTTATAACTATCATATACTCAGCATATTATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358333	1100	0.0	27 - 1100	100	1074 / 1074	CUST_22483_PI390587928	ABC07813
AK252759.1	923	0.0	27 - 904	100	878 / 878	None	ABC07813
AK373473	926	0.0	51 - 926	100	876 / 876	None	ABC07813
MLOC_66309.1	3627	0.0	1 - 836	99	835 / 836	CUST_22483_PI390587928	ABC07813
MLOC_11845.1	1529	2e-111	1234 - 1452	100	219 / 219	None	ABC07813