barSeed - Barley Seed Development Database

Probe ABC07800

Source Contig ABC07800

barSeed

Links

Affymetrix Source Sequence (686 bp)

>ABC07800 686
GGAAGAAGTAGCGTAAGATCACCTTGAGGTTAGGGTACAAGTTCCTTCCATCTCACCCAA
GAACAACAGGTTAAGAAATCAGCCTCTTTCCCGGATTTTTTTGCTGATTCCTAGGGGAAA
TGGCCTTGAGGAGGATCGTCAAGGAGCTCAAGGACCTGCAGAGGGACCCCCCGACCTCCT
GTAGCGCAGGGCCGGTGTCGTCGAACGACATGTTCCACTGGCAGGCGACGATCATGGGGC
CGAGCGACAGCCCCTACTCGGGCGGCGTGTTCCTGGTGACCATCCACTTCCCGCCGGACT
ACCCGTTCAAGCCACCCAAGGTGGCCTTCAAGACCAAGGTTTTCCACCCCAACATCAACA
GCAACGGCAACATCTGCCTCGACATCCTCAAGGACCAGTGGAGCCCCGCCCTCACCATCT
CCAAGGTTCTGCTGTCGATATGCTCGCTGCTGACGGACCCGAACCCGGACGACCCGCTGG
TGCCGGAGATCGCGCACATGTGCAAGGCCGACCGGACCAGGTACGAGTCCACGGCCAGGG
GCTGGACGCACAAGTACGCCATGGGGTAGATATAACTAAATAAGAGCTGCAGCTCGATCG
AGCTCAAAGATGTGGAAAGTGCTTATGATGTGCGGACGAATAATAATCTATGAAACTTTG
CTTCGAATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249816.1	886	0.0	25 - 693	99	666 / 669	CUST_11631_PI390587928	ABC02229 ABC07800 ABC39432 ABC49780
MLOC_70672.1	971	0.0	1 - 638	99	638 / 639	None	ABC02229 ABC07800 ABC39432 ABC49780
AK249228.1	858	9e-88	175 - 604	80	349 / 434	CUST_19045_PI390587928	ABC02229 ABC02231 ABC07800 ABC37618