barSeed - Barley Seed Development Database

Probe ABC07650

Source Contig ABC07650

barSeed

Links

Affymetrix Source Sequence (607 bp)

>ABC07650 607
GGAGAAACCCGCGGAGGACGTGGTGAAGCGACCGGACACGTTCCAGGAGGGGACGGTGCT
GATCCCGGGGATCGGGAGGTACGAACTGGGCACCCACTACATCCCGGACATCGGCGGGCT
CGACCACAGCATCCCGGCCGCCGCCAACGGGCAGTTCATCCCCGGGGCCGACGACACCTG
GGTGCCCAACCCCGGCTTCGAGGTGCCCAACCCTTTCCGCCCCGGCTCCGACTCTCCCTG
ATGGGTCGAGCACGTCCACGCTACGCCCATCGCCCGTCCACACGTCGCACCCATCCATCT
ATTTCGTAGCTAGCCTGCTATAAATCGATTTCGCTAGCTTTTTTGGTTGCTACTACAATA
AAATAGCCGCTACTACATAGCCATGCATGCATGTCTGATGCATGCATGTGGCTGCGACTG
CCTGCGCGCCGTCGACGTCTCGTGTTTTGATTCAAGTGGTACGTGTGTATGGGATATGGA
TGGATGCGTAGGAAGAAGTATCCATCGCATGTCTCGCTTGGTTTGTTGTTACCAGTGTAA
TGTGTTTCAGTTCAGTACGCTTTTTTTAATGATGAGAAATGGTTTAGCTTGATAAAAACC
CCAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_218.1	1469	0.0	458 - 1050	99	590 / 593	CUST_6465_PI390587928	ABC07650 ABC40901
MLOC_22943.1	762	2e-104	33 - 594	80	458 / 574	CUST_6482_PI390587928	ABC07650
AK360133	780	6e-104	220 - 780	80	457 / 573	CUST_6482_PI390587928	ABC07650
MLOC_57751.1	1112	1e-86	389 - 621	92	214 / 233	CUST_6481_PI390587928	ABC07650 ABC30049