barSeed - Barley Seed Development Database

Probe ABC07457

Source Contig ABC07457

barSeed

Links

Affymetrix Source Sequence (654 bp)

>ABC07457 654
AGAAGAGTATGATTTCGATGGCACAAGAAATTCAACAAATGCGGGCCGAATTAGCTAGTT
TTGATGGCAGACCATGGGGCACAGTCTTTCTGGATACGTGGAGGTTCTTCAGTCCATATG
CTGGACCCTTCTCGAGTTTGCCAGTCTTTCTGGGTGGAGCACATGGGATGAAGCTGGGCA
GTCCTGAAGCTACCTTTCCTACTCAATATGGAGATAAATACAATATACACGCGGGAGTTT
CTGAGAAAGGTCCTTCACACCCTCCTGAATCTTCGTGGGGCACATATGATAAGAACCGTT
TCCAGTACCGCTAAGAGCCCAGCTGCTACATTCCTGGGAGAAAGAATCACCTTCTAGGTG
TTAATTATCATATCACATGGTTTAGAATATCTTATCTACCTACTTGTTTGTGTTCTAGAC
TTCTTTATGCTTTGAATAATTATACTTTCTGTGTTAGTTGATAATATTTGTGCTGGCAGT
ATCCTGTTACTATTTACATATTGGCTCCAGATTTCTGCATGTTACTAGGATATCCAGGTT
TCCTTGTTAGATTGATCTATGACTATGACCATGACTAGCAATTATTTGAACGTGGCTTCG
ACTTTGGAAAATCAGAGTGACTTAATCGTGTCACATATAGAGCACGTTTTCTGA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_33676.1	6521	0.0	5514 - 6015	100	502 / 502	CUST_18309_PI390587928	ABC07456 ABC07457 ABC17596
AK367504	1537	0.0	1037 - 1537	100	501 / 501	CUST_42051_PI390587928 CUST_18309_PI390587928	ABC07455 ABC07456 ABC07457
MLOC_33676.2	5718	4e-116	5448 - 5674	100	227 / 227	None	ABC07456 ABC07457 ABC17596
MLOC_33676.3	643	7e-104	24 - 228	100	205 / 205	None	ABC07456 ABC07457
MLOC_13427.1	1325	9e-73	1057 - 1211	99	153 / 155	CUST_42051_PI390587928	ABC07455 ABC07456 ABC07457