barSeed - Barley Seed Development Database

Probe ABC07265

Source Contig ABC07265

barSeed

Links

Affymetrix Source Sequence (1230 bp)

>ABC07265 1230
CCACTTCCCTCCCGTGCTCCTCCCCTCGCCTGGGCTCTCGTCCCATCCCTGCCCGAACCC
TAACCTCAGATGTCGCTTCCTGCGTGAGAGGGCGCTGACGCGGCAGCAGCATTGAAGGGG
GTTTCGTCGTCGTCAGCGGCGACAGATGTATAAGCAGGGATCGGCCGGAGGGGCGGGGCT
GGACCGGAAGCGCATCAGCGAAGCGCTCGATAAGCACCTGGAGAAGGCGGCCGCGTCGCC
CTCCACGTCGAGAGGCTCGGCGGGTGCCCGAGGTAACCGCAACCGCGTCGTAGTGCCGTC
CTCCATCCCCAAGGGCCGCTGCTCCGAAGGGGAGTCAGAGTCGGACAGTGAAGCATCAGA
TGTTGGTGGCTCTGATGGAGAAGATACCTCATGGATTTCATGGTATTGCAACCTAAGAGG
GAATGAGTTCTTCTGTGAAGTCGATGATGATTACATTCAAGATGACTTCAATCTTTGTGG
GCTTAGCAGTCAAGTTCCATATTATGATTATGCTCTTGATCTCATTTTAGATATCGAGTC
TTCCCATGGTGATATTTTCACAGAAGAACAAAATGAGCTAGTGGAATCAGCTGCTGAGAT
GTTGTATGGGCTGATTCATGCACGATACATTCTGACCAGTAAAGGGTTGGCTGCTATGCT
GGAGAAATACAAGAACTACGACTTTGGACGATGTCCACGTGTTTATTGCTGTGGACAACC
ATGCCTACCAATTGGACAATCAGATATTCACCGATCTAGTACAGTGAAGATATACTGTCC
TAAGTGCGAAGACATCTACTATCCACGTTTTAAATACCAAGATATTGACGGAGCCTACTA
TGGGACAACATTTCCTCACCTTTTTTTGATGACGTACGATCCCCTCAAGCCCCAAAAGAC
CTCGCAGCGGTATGTTCCTCGTGTATTTGGCTTCAAGCTCCCCAAGCCATGACGTGGAGG
TGAAGGAAAAGATAAGAGGCCCCGGAAGACTACTGTAAGACTGCAATCGCCAGCTGGCAG
CCCGATCATGCATGTTGCGGTGATGCTGCCCCCCCATATTGTGTGCCCCGCCAAGTTTAC
TCATCAACATTGAAATGTTGGTATAAAAGAAGACATGAGACGATGTTGTAACCTTATTCC
AGCTTTACTGGCTATTAAACCTGGACCTCTGTTTCCAAAACCAGCGGCTATCGAGAAATC
AAAGTTATGCTCGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251267.1	1189	0.0	2 - 1149	99	1135 / 1148	CUST_17269_PI390587928 CUST_17270_PI390587928	ABC07265 ABC36833 ABC41033
MLOC_13689.1	1333	0.0	184 - 1072	99	879 / 889	CUST_17269_PI390587928 CUST_17270_PI390587928	ABC07265 ABC36833 ABC41033
MLOC_13689.2	1336	0.0	184 - 1075	99	879 / 892	CUST_17270_PI390587928 CUST_17269_PI390587928	ABC07265 ABC36833 ABC41033
AK355352	924	4e-173	6 - 335	100	330 / 330	None	ABC07265 ABC36833 ABC41033
MLOC_27918.1	846	4e-173	465 - 794	100	330 / 330	None	ABC07265
MLOC_27917.1	635	1e-172	255 - 583	100	329 / 329	None	ABC07265