barSeed - Barley Seed Development Database

Probe ABC07215

Source Contig ABC07215

barSeed

Links

Affymetrix Source Sequence (1212 bp)

>ABC07215 1212
GGGTTCTTCTTCTCCCCCTCGCCCCCGACTGCCACGCCTATCGTCGCCACCCGCTCCGCC
GACCCGCCGCCGCGCCATGGTGAGGCTCAACGCCGACCTGATATGGAAGAGCCCGCACTT
CTTCAACGCCATCAAGGAGCGCGAGCTCGACCTCCGAGGCAACAAGATCGCCATCATCGA
GAACATCGGCGCCACCGAGGACCAGTTTGACACGATTGACTTGTCGGACAATGAGATTGT
CAAGCTTGAGAACTTCCCTTTCATGAATCGCCTTGGCACTTTGTTAATCAACAACAACAG
AATAACACGTATCAATCCCAACCTTGGTGAGTTTTTACCCAAGATGCATACTTTGGTGCT
GACGAACAATCGCCTTACAAGTCTTGCGGAGATTGACCCCCTGGCCTCTCTTCCAAAGCT
GCAATTTCTCAGCTTACTGGATAATACCGTAACTAAGCAACCAGACTATAGGTTATATGT
GATCCACAAACTGAAGCATCTGCGTTTGCTGGACTTCAAGAAAGTGAAACAACAGGAGAG
AGCCGAAGCAGCCCAAAAGTTCCACTCAAAGGAGGCAGAGGAGGCGGCAAAGAAGGTTGC
TGCCAAAGCTTATATTCCAGTAGTGATGGATGCTCAAGGTACCACAAAAGACCAGGGCCC
TAAAGTAGTCGCTCCGACGGCTGCACAAATCACAGCTATCAAGGCCGCTATCGTGAACTC
TCAGACACTTGATGAAGTTACAAGGCTTGAGAAGGCGTTGAGCACTGGCCAAGTTCCTGC
AGAGTTTGCGCTCCCCAAGCCTGACACCAACATGGCTGAAGCGTCAGAGGAGGCTGAAGC
CGAGAAGATGGAGACAGATGGTCAGGGCCCAGAGGATGGGGTTGTTGAGCAGAAGCAAGC
AGATGAAAGCACCCCAATTCAGGAGGATTGATGTCATGCATACACCTGAATCTGCCAGTT
CTCGTGGGGGGATGAAACCATGTGCCTAATCTTTCCTAATCTCACAGAAACCTCTTGATG
AACTCTCTCCTTGTGTCAGTACTGATGTATCTTGTGGATGCTAACGACAATTTTGAGTAC
ATGGTACTGTTGTCCGAGTTGTGGAAGGTTTACGCCCAGCGGACCTAGATGTGTTGGATG
TAATAGACTGTAGAAGACGATGCGTTGCGTCCTGAATGAATGTTGTTGAGACTCTAAAAA
AAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368609	1318	0.0	33 - 1228	100	1196 / 1196	CUST_21131_PI390587928	ABC07215
MLOC_11572.1	1578	0.0	8 - 1006	100	999 / 999	CUST_21131_PI390587928	ABC07215
MLOC_11572.2	1803	4e-178	893 - 1231	100	339 / 339	CUST_21129_PI390587928 CUST_21131_PI390587928	ABC07215
MLOC_71414.1	781	8e-101	495 - 694	100	200 / 200	None	ABC07215