- Probe ABC06948
- Source Contig ABC06948
Affymetrix Source Sequence (1065 bp)
>ABC06948 1065 AGGAGGTTTTGAATAAAAGCTGGCTGGCACGTTGCAGGCACCCCGGATCCTACTCTAAGA AGTGCGAACAAATATTTACAGGACTCCATTGTTTTAATGAGGAAGTTGCTTCAGAAGCAA GAGTCTGGTTCCAAGAAACCCAAGAAGGGAGCCGCACCTCCTCCATCAGCAGAAAACAAG CTCACTGTTGGTCTGATATATGTCAACGAGCACTATGATGGATGGAAAGAACAATGTTTG AGGGTGCTTCAATCAAATTTTGATAGCCAAACATGCTCCTTTGCCCCCGACGAGGAGATT AACGAAGCGTTAAGGAACTGCTTCATCGACCGCGAATCAAATTTCAAACAAGTACAGAAG CTCTGCATGCCTTTCATCAGGTTCAAGAAAGATGAAGCAAGGAACGTTGGTCCCCAGGCT CTAAATTTGAAGCTTCCTTTTGGTGAAATTAATGTGCTTGAGGAGAACCTAGAGCTGATC AGAAGGCAGTTGGGTCTTGAGCATGTTGAGGTCCTGTCGGCACTTGATGGAGCTGCTCGT GCCAAAGCTGGAAAGCATGCTTCTCTGCTAGACAAGAATCCGCCTTCCCCTGGTGAGCCG GTTGCAATATTCATGAGCAAGCAGGAGTTTGAAGTCCAGATTTAAGCTTCAGATTAATCT TCTCACAGAACTTTGTTGAGGTTTTTTTTGCAAGGCAAGGCATATCGACTGGATGTTCCT CCTTTTCATTCCAGCATGACGCGCCTGTTGGGAACATGGAAAGAAGCGTTATTTCTAGCC TGACTGCAGATGATTGAGAAGGAACTTAGTTTCCAAGCTTTTGCCAATTTTGAGATGGCA AGTACAGAATACAATGAGCATTCTTGCTTTATATACAGCAATGTCTAGTTTGTTTACTTA CCAAAGTTGTGATATATTCCTGGCATTTGATCACATACTCCCATGACATATTGTTTCTGC TGAAATGTCCAGTGACCATAGTAATGCCGTTATGCTGTCAGTTTTTTGGGATGTGTCATT GTCAATGTGAAATATATTTCTGAGATATGTCATGCATCCTGTAAC
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_68654.1 | 2194 | 0.0 | 1121 - 2187 | 99 | 1058 / 1067 | CUST_11656_PI390587928 CUST_34739_PI390587928 CUST_29045_PI390587928 CUST_28837_PI390587928 | ABC06948 ABC06949 ABC06950 ABC40620 |
| AK356763 | 3864 | 0.0 | 2881 - 3864 | 99 | 980 / 984 | CUST_34739_PI390587928 CUST_28837_PI390587928 CUST_27253_PI390587928 | ABC06948 ABC06949 ABC06950 ABC40620 |
| AK363274 | 3768 | 0.0 | 2724 - 3405 | 95 | 648 / 683 | CUST_11655_PI390587928 CUST_34739_PI390587928 CUST_28837_PI390587928 CUST_27254_PI390587928 | ABC06948 ABC06949 ABC06950 |
| MLOC_66670.1 | 2206 | 0.0 | 406 - 1087 | 95 | 648 / 683 | CUST_11655_PI390587928 CUST_34739_PI390587928 CUST_28837_PI390587928 | ABC06948 ABC06949 ABC06950 |
| AK362746 | 3948 | 0.0 | 2799 - 3479 | 95 | 647 / 682 | CUST_34739_PI390587928 CUST_28837_PI390587928 CUST_27254_PI390587928 | ABC06948 ABC06949 ABC06950 |
| MLOC_66670.2 | 2242 | 0.0 | 443 - 1123 | 95 | 647 / 682 | CUST_34739_PI390587928 CUST_28837_PI390587928 | ABC06948 ABC06949 ABC06950 |
| MLOC_3685.4 | 3505 | 0.0 | 94 - 724 | 86 | 545 / 632 | None | ABC06948 ABC06949 ABC06950 |
| MLOC_3685.1 | 3987 | 0.0 | 576 - 1206 | 86 | 545 / 632 | None | ABC06948 ABC06949 ABC06950 |
| MLOC_3685.2 | 3982 | 0.0 | 571 - 1201 | 86 | 545 / 632 | None | ABC06948 ABC06949 ABC06950 |
| MLOC_3685.3 | 3765 | 0.0 | 357 - 987 | 86 | 545 / 632 | None | ABC06948 ABC06949 ABC06950 |