barSeed - Barley Seed Development Database

Probe ABC06888

Source Contig ABC06888

barSeed

Links

Affymetrix Source Sequence (981 bp)

>ABC06888 981
CATAAAAACAGCTATAAGTAAGTTCCGTTCTGCCATCCGTTGCAGTTTGACTTCCACCGG
GCTATTTACAACCTCGGAACTGTCCTGTATGGCTTGGCTGAGGATACCTCGAGATCTGGG
GGTCCTGATATCTCTCCAAATGACCTGTATAGTCAGTCTGCTATTTATGTTGCAGCTGCT
CATGCATTGAAGCCAAATTATTCGGTTTATCGCAGTGCTCTACGGTTAGTCCGCTCAATG
CTGCCTTTGCCATATTTGAAAGTGGGATATTTGACTGCTCCTCCGGCAGACGACCCCATT
GCACCACATAAACATTGGGAGAGGTCACAGTTCATCTTAAACCATGCGGAACTCCAGCAG
GTCAATGCTTCCGAAAGCGCTCCTGTCAAACCAAACGCGCTCGTGGAGAAAGCCAAAAGG
TTTATCAAGGTAGACGTTGCGGACATAGTTTCAGTGTCCACGTGCTCTGATCTGACGCTG
CCGCCTGGTGCTGGCCTCTGTATAAACACAACTCATGGGCCTGTGTTCTTGGTTGCTGAT
ACCTGGGAGTCTCTTGATGGTTGGCTAGACGCGATACGTCTTGTGTACACCATTTTCGCA
AGGGGGAAGAGCGATGTCCTGGCGGGCATCATCACCGGCTGATCGATGATGCCATGTTGT
GTGTGTTGTGACTAGCTGGGTCTGGACAAAGCAACATGTATATCAGTATGCATTCTGTGT
CAATTCAAAAAACCCCACCACAGTTGTTTTTTATGTATGCCCTTACTGCTCCGATGTGAT
CTTTCACAGCTTGTGTAGAGTAATGTGTTCAACCATCCACACCATAGGCGGCATTGTTTT
GTACCTGTAACACATATATACCTTCAAGTTCAAATGTATGACTTGTAATAGACGACGGAT
GAGACGATGAGTTTGTACTGTCATCCATCTAGTTCAAATGTTTGTATGTTCTATCCTGTA
TTTTGACTTCCCAATTCGAAC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_31768.1	1464	0.0	405 - 1388	99	972 / 984	CUST_7232_PI390587928	ABC06886 ABC06888
AK353728	1803	0.0	905 - 1803	99	898 / 899	None	ABC06886 ABC06888
MLOC_31768.2	742	0.0	121 - 742	99	615 / 622	None	ABC06886 ABC06888
MLOC_55522.1	2882	1e-98	247 - 881	77	501 / 648	CUST_27394_PI390587928	ABC01920 ABC06886 ABC06888 ABC37591 ABC40027 ABC43138