- Probe ABC06843
- Source Contig ABC06843
Affymetrix Source Sequence (1820 bp)
>ABC06843 1820 TTCATGCCACCACCCCCTAGAAGGCCGCGCAATCGTCCTAACCGTTCTGGGGGAAGTGGA AATGCTCCAAAAGGCTCTGAGAGCTCCACTGGTCAAGGTGGAAACAATGGTCTGCAGACA GCTTCCCTTGTGGGGATAATTGTTGGCTCAGTACTTGCTGCTTTGTGTGTGCTTCTTCTT TTGGTATTATGCATTCGCAAATCTCGGAAAAGGAAGGATGATAGCAGCACGGGATCCAAA GATTTTGTAGGTCCACTATCAGTGAACATAGAGGAAGCATCTAACAGAGAAATCCCAGAA CAAGGTCTTGAAAATACGGCTATGAAAGTCCTGCCTGCTGAGAAAATGACTCCCGAGAGG GTTTATGGTAAAACTGGTTCTATGAGAAAGACAAAGGTTCCCATAACTGCGACACCTTAC ACCGTGGCTTCCCTCCAAGTAGCGACGAATAGCTTCTGTCAAGATTCCCTTCTGGGTGAG GGTTCACTTGGTCGTGTTTACAAGGCCGATTTCCCCAATGGAAAGGTTATGGCTGTTAAG AAGGTAGACAGTGCCGCTATTTCCTTGCAGGAAGAAGATGATTTCCTTGAGGTTGTATCA AGTATGTCACGACTTAGGCATCCAAACATCGTGCCACTTACAGGGTACTGTGTGGAGCAT GCACAAAGGCTTCTCGTTTATGAGTACATTGGAAATGCAACGCTGCATGATATGCTGCAC TTCTCTGATGAGATGGGCAGAAGACTTACATGGAACATCCGTGTAAGAATAGCACTTGGC ACCGCTCGGGCATTAGAATACCTGCATGAGGTGTGCTTGCCCTCTGTTGTTCATAGAAAT TTTAAGTCCGCAAACATCCTACTTGATGAAGAGCATAACGCACATTTATCTGACTGTGGT CTCGCTGCCTTGACACCCAATACCGAGAGACAGGTTTCGACTGAAGTGGTTGGCTCATTT GGATACAGTGCCCCAGAGTTTTCCATGTCAGGAATTTATACTGTAAAGAGTGACGTGTAC AGTTTTGGAGTAGTGATGCTAGAGCTATTGACCGGAAGGAAGCCACTAGACAGTTCTAGA GAGCGGTCAGAACAGTCTCTTGTTAGATGGGCTACGCCTCAGCTTCATGATATCGATGCA CTTTCTAAGATGGTTGATCCAGCACTAAATGGAATGTATCCTGCAAAATCGCTCTCCCGC TTTGCAGACATAATTGCACTCTGTGTTCAGCCGGAGCCAGAGTTCCGTCCTCCTATGTCT GAGGTTGTCCAGCAACTTGTGCGCCTGATGCAGAGGGCTAGCATAGTAAGGCGGCAATCA GGTGAGGAACTAGGGTTTTCTTACAGAGCTCCAGAACGTGAAGGAGATGCGAGAGACATT TCCTTCTGAGCACTTTCTACAATGGCAAAAGTGAAAAGGTGGTCTGAGGGTCAAATACAA GAATTGAGTGACTGCATATGAACTGGATACATGAGTTGTTCAGACGGCGGTTGAGGATCA AACGAATTTGAGGAGATAATTTTGGTATTTACATTGTCCAATTATGCTCATTCTTCTCAC TTTTTTTGTCCGGGGAAGTCTACTTCACAGTTAAACTGTGTTCTCAAATCAACGGTGTGT ACAGCATGTTAGTCGGGGTAGAGAAAAGAAATGTTAATGCAACAGGATAACTTTGTTGGA TGTCAAACAAGTACATACCTTTTACTTGGCACCGTGTTCCATTCTACATCATGTTCTTAT TGTATAGGTGAAAATTTCTATGTTATGCAAATTCTTTTTTAAGTAATTTACGGGAAAACT TTGAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_59102.2 | 4013 | 0.0 | 695 - 2498 | 99 | 1803 / 1804 | CUST_16545_PI390587928 CUST_19772_PI390587928 CUST_9714_PI390587928 CUST_25667_PI390587928 CUST_36013_PI390587928 | ABC00615 ABC06842 ABC06843 |
| MLOC_59102.1 | 3887 | 0.0 | 606 - 2409 | 99 | 1803 / 1804 | CUST_16545_PI390587928 CUST_19772_PI390587928 CUST_9714_PI390587928 CUST_25667_PI390587928 CUST_36013_PI390587928 | ABC00615 ABC06842 ABC06843 |
| AK375989 | 2978 | 0.0 | 1185 - 2978 | 99 | 1793 / 1794 | CUST_19772_PI390587928 CUST_36013_PI390587928 | ABC06842 ABC06843 |
| MLOC_15779.3 | 2898 | 0.0 | 1612 - 2633 | 81 | 830 / 1025 | CUST_36011_PI390587928 | ABC06842 ABC06843 |
| MLOC_15779.2 | 2761 | 0.0 | 1482 - 2503 | 81 | 830 / 1025 | CUST_36011_PI390587928 | ABC06842 ABC06843 |
| MLOC_15779.1 | 2754 | 0.0 | 1414 - 2435 | 81 | 830 / 1025 | CUST_36011_PI390587928 | ABC06842 ABC06843 |
| MLOC_15779.4 | 1104 | 9e-87 | 648 - 1091 | 80 | 358 / 447 | None | ABC06842 ABC06843 |
| AK373933 | 1999 | 3e-72 | 1851 - 1999 | 100 | 149 / 149 | CUST_16545_PI390587928 CUST_9714_PI390587928 CUST_25667_PI390587928 CUST_36013_PI390587928 | ABC00615 ABC06843 |