barSeed - Barley Seed Development Database

Probe ABC06632

Source Contig ABC06632

barSeed

Links

Affymetrix Source Sequence (845 bp)

>ABC06632 845
GATTCCCACCCTCTTCTTCCTCTCGTCTCCTCCTCTCCACACGCGCACGGACGCACTTCC
ATGGCCGCCGCCTCCTCCTCGTCCCCTCCTCTCAGCCCCGCTTCCTCGCGCTTTTTACGG
ACTATGCGAGCGTGCGTGTGCTAGGGTGGATCGTGCACACGGAGGCGTTTTGTTGGTGAA
GGGAGGAGCTAGCTAGGCTGTGGTGTGGGGTGGAGCTTGCTGGGGTATGGCCTGCAAGAA
CGCGATGAGGAGAACGACGAGCTTGACGGAGGTCGCGCCGCCGTCCGTGCTGGCGGTGGT
GTTGGAGGACGAGGACGAGGACGAGCAGGCCAGGACTGTGGTGCAGGCCGAAGAAGGTGG
CGCCGACGGGGGGCAGGACTGGCTGGCGGCCCTAGGCGGCGGCAGCGGTGCCCCCGGGAC
GGACTGGCTCGCGGCGTACCGCGCGCGCGCGGCGCCGGCGCGGGCGGGGCTCCGGCGGAA
CTCGGCCGACTACTCCAAGGTCGAGACCGCTGCGTTCCTCCGCCACTGCGGCCTCTGCCG
CCGCCTCCTCGGCCCCGGCCGCGACACCTTCATGTACAAGGGCGAGGCGGCCTTCTGCAG
CCTCGAGTGCCGGCAGCAGCACATAACGCACGAGGAGTGGAAGGACAAGTGCACGTCAAG
GTCGCCGGCGCCGGCGCCGGCGACCAGCCGCGGCCGCTCCGGCAAGACAGACACCGTCAG
CCACCAGTGGTCGATCGATCGACCATCGCCTCAGTACGACTGCATAGTTTTTTTTTTATT
AATCTTATAAGTATGTACTTGGAGCTCGATCGAATCCGTTTCTGAGATAAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK362406	1040	9e-54	891 - 1005	100	115 / 115	None	ABC06632 ABC06633
AK361695	676	0.0	3 - 582	100	580 / 580	None	ABC06632
MLOC_16647.1	662	0.0	1 - 423	100	423 / 423	None	ABC06632
MLOC_40996.2	262	2e-129	1 - 260	99	257 / 260	None	ABC06632 ABC06633
MLOC_40996.1	378	2e-71	1 - 147	100	147 / 147	CUST_34768_PI390587928	ABC06632
MLOC_34348.1	617	9e-54	221 - 335	100	115 / 115	CUST_17289_PI390587928	ABC06632 ABC06633