barSeed - Barley Seed Development Database

Probe ABC06165

Source Contig ABC06165

barSeed

Links

Affymetrix Source Sequence (664 bp)

>ABC06165 664
GGGTGACATTCAGAACCTTGGTGCCAATAATACCCCTCGGCCTGGGATCGCAGGGAACAT
GCACGCATCTGGTGAGAGGCTTGTGACCATCAGTGACCTGAAAAGTGAGGAGAGGAAGCA
GAAGCTCTCCAGGTACAGGAAGAAGAAGATCAAGAGGAACTTTGGCAGGAAGATCAAGTA
TGCTTGCAGGAAGGCTCTAGCAGACAGCCAGCCGAGGGTGCGAGGGAGGTTCGCCAAGAT
GGACGATGGCGACATGCTCAAGCCGAGGAAGTAGGACGGCCATGGAAGACCGCCTGCTGC
CAAACTCATGAGGAAGACAAGGTTGTTGCAAGGAAGGAATTGAGCTACTGCTGAGCTGCC
AGTGACTTGTCTGCGTCTAGAAGCTTCTAGGGCGATGGCCGCTGTGCTGCGCCGCGCCGC
CCATTGGAATTCGTTTTCGCTCGCTCCATCAAATCCGTTCCTTTGGGTGACATTTTCTAT
TTTCCGTGTTCGTTTGTAATAATATGATGGTCCTCCCAGTGGTGGTGCAAGAGAGTGGAG
AGCCCTAGCTAGGCAGCCAGGCTCCTCTGTGTACAAAGGCTTGAACTTGAACTTGGACTT
GGTACTAATAAATAAATAAAACCCAGGCTCCTTTTTGCTTGCCATGTAAAAAAAAAAAAA
AAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250075.1	1483	0.0	862 - 1482	98	619 / 632	CUST_27264_PI390587928 CUST_25314_PI390587928	ABC06164 ABC06165
MLOC_37420.3	860	0.0	290 - 860	99	569 / 571	CUST_27264_PI390587928	ABC06164 ABC06165
MLOC_37420.2	1053	0.0	492 - 1053	99	560 / 562	CUST_27264_PI390587928	ABC06164 ABC06165
MLOC_37420.1	1136	0.0	579 - 1136	99	556 / 558	CUST_27264_PI390587928	ABC06164 ABC06165
AK355694	1405	2e-118	807 - 1137	90	308 / 342	CUST_25314_PI390587928	ABC06164 ABC06165
MLOC_26295.1	1407	2e-114	446 - 766	90	297 / 330	None	ABC06164 ABC06165