barSeed - Barley Seed Development Database

Probe ABC06082

Source Contig ABC06082

barSeed

Links

Affymetrix Source Sequence (768 bp)

>ABC06082 768
GAGGCCTGCAAAGCAGAATACATCATCTCACGAAGGGCAGTTACAGTATCTTATATATAC
CTTGGAGAATGCAGTCCTCAGCCTACCTGAAAGTCAAGACAAAATGGTGTGGCTGATAGA
CTTCACAGGATGGACACTGGCCCATGCAACCCCCTTCAAGACGGCCAGAGACAGTATGAA
TGTCTTGCAAAACCATTACCCAGAGAGGCTTTCAATTGCATTTTTGTTCAATCCACCCAA
AGTATTTGAGGCTTCTTTTAAGGCTCTCAAAGTATTGGTTGACCCGAAATCAGTCAAGAA
ACTGAACTTTGTGTACAAGGAGAATATGGAGAGCATGAAGACAATGTACAAGCACATTGA
TCCAGAAGTCCTTCCTGTAGAGTTTGGGGGGAACAACAATGTAGTGTACAACCATGAGGA
TTACTCTAAGTTGATGACAAAAGATGACATCAAAATGACAAGCTTTTGGGCGGCAGATGG
TAACCATGCCGTCAATGGCCACTCGGTTCCTGAGGTTCAATCACGGTCATCACAAATTGT
TGCTAAAGCAAGTTAGAGGAACATCGGCCATCCATCCCACCTGATGTTGGTAAAGCAAAT
TGAGATTCATTAGGCAGCTATTATGAGTTTACGATGGCCTTCGGTACAGCTCTGAAAGAG
GAATAAATAAATGTAACTGCAAAATATCTCGCTTGTGATGTTACAAACAGCAGTTATACT
TGTCCATCACCAAATAAGTGATTTCATTACTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70444.1	1479	0.0	819 - 1479	100	661 / 661	CUST_14776_PI390587928	ABC06082 ABC06083 ABC06085
MLOC_70444.2	1389	0.0	729 - 1389	100	661 / 661	CUST_14776_PI390587928	ABC06082 ABC06083 ABC06085
AK250907.1	1433	0.0	685 - 1413	87	636 / 735	CUST_38827_PI390587928 CUST_14776_PI390587928	ABC06082 ABC06083 ABC06085
MLOC_67500.1	1277	0.0	1 - 680	87	599 / 686	CUST_14776_PI390587928	ABC06082 ABC06083 ABC06085
MLOC_64122.1	1727	2e-169	928 - 1502	85	494 / 578	CUST_38828_PI390587928	ABC06082 ABC06083 ABC06085
MLOC_67500.2	1063	3e-142	1 - 394	90	354 / 394	CUST_14776_PI390587928	ABC06082 ABC06083 ABC06085
MLOC_67500.3	769	6e-120	10 - 333	91	294 / 324	CUST_14776_PI390587928	ABC06082 ABC06083 ABC06085
MLOC_64122.2	842	6e-100	514 - 834	87	280 / 321	None	ABC06082 ABC06083 ABC06085