barSeed - Barley Seed Development Database

Probe ABC05839

Source Contig ABC05839

barSeed

Links

Affymetrix Source Sequence (808 bp)

>ABC05839 808
GCCGGCGCCACCACGGGCCGGACGGCAACGGCGACACGCACACGCACGCACGCACACACA
CTCACTCCACGCTCGGCCAGCACAACAAGCAAGTTCAGTTCAGGTTGGGGGATCGATCGG
ATAATGGCGCCGGCGCCGGTGGAGTTCGTGGGCGCGAGGGAGGCAGGCGGGGTCGGCGGG
GACGCGCTCTACTGCGCCATCATCCTGTGGCTGTCCGTCATGTCGTGGATCATCTTCACC
TGCGTCGGCGGCGACGACGGCGGGAGGCGCGGGAGGAAGGGCCGCCGGGACACCAAGGTC
TTCGTCGGCGCCGAGCGACTCTGCGACGGCACCGGCCCGCGCTGCAGCGGCGGCTACGGC
CTCTGCGGCTCCTGCGTCGACTAGCCTGCCGCCGCCCGCCCGGCTCCTCCAAATCGTACG
TTTGGTTGGTCGGTAACTTCGTGTAATCGGGCGTCAAAAAGTAGTATGATCATCTACTAG
TATCTATGGTGTGATGAACAACTCCTTTTCTCATGCGAGCTTCTTGCAGCCTGTAAATAG
TTTTAGCGATCGATGATCGATGAGATGAGATGAGATAGTATGATCTGGTATTAGTAAAAT
GAAAAACTCCCCTTTGTGAAGACAATAAGAGGGAGCTAGCAGCGTCTTCCGTCTGATCCT
GGTTCCCGGTTTGGCTGCAACCTGCAAGAACTAGTCTCGATTCTTCATCTTCTTCTCGTT
CTCGCTCGATCATGCGCAAACAAATTTCTCAATCACAACAAGCACTTTCTCTTTCGAGTG
GACGATTTGCGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_58483.1	1230	0.0	243 - 1037	98	778 / 796	CUST_20242_PI390587928 CUST_15443_PI390587928	ABC05839 ABC44739
AK375020	626	0.0	5 - 626	99	617 / 622	CUST_15443_PI390587928	ABC05839 ABC44739
AK248394.1	687	1e-121	417 - 668	98	247 / 252	CUST_15443_PI390587928	ABC05839 ABC44739