barSeed - Barley Seed Development Database

Probe ABC05754

Source Contig ABC05754

barSeed

Links

Affymetrix Source Sequence (1009 bp)

>ABC05754 1009
GCGGCACCCGCTCCACACCTCACTTTCCTCCCCAGCAGAGCAAGCAACCCAGGAAACAAA
GAGACAGAGTGAGAGAGAGCAATGGCGTCCATCATCGTGCAGGTGTCCGCCCTGCTCCTC
AACCTCATCGCCTTCGGCCTCGCCGTCGCCGCCGAGCAGCGCCGCAGCAAGGCCACGGTG
ACGCCGGATCTGGCCAAGGAGTACGACTACTGCGTCTACGACTCCGACGTCGCCACCGGC
TACGGCGTCGGCGCGCTCCTCCTCCTCACCGCCGCGCAGGTCGTCGTCATGCTCGCCAGC
CGGTGCTTCTGCTGCGGACGCGGGCTCAAGCCGGGGGGCTCCCGCGCCTGCGCCCTCATG
CTCTTCCTCTTCTCATGGCTGACCTTCCTCGTCGCAGCGGCGTGTTTGCTGGCAGGATCA
GTGCGTAACGCATACCACACCCGGTACAGGGGTATCTTCAACGGCGACCCACTCTCTTGC
GAGACGCTGCGCAAGGGTGTCTTCGCTGCCGGTGCAGCCTTCACCTTCTTCACGGCCATC
CTCAGCGAGTTCTACTACATCAGCTACTCCAAATCCCGGGATGCCGCCGGTGGCGCTCCA
TACGGCGGCTCCACCATCGGCATGGGCACTTACAGTTAAGGAGCTCAGCGCTGGCATGGG
CACTTACAGTTAAGGAGCTCGGCGCTGGAGGTTTACGGGAAGGTTCAGTCCGTTCCAGGG
CGGATCATGCATGTAGTTCGTGGAGTGTGGTGTTCTTGTTAACGTTACAGTGGTAGATTA
CGGTGTAAATGTGTTTGCTGTCTTCACTAGGTTATGTATGAGATTTCCTGGTTGGGCCTT
ATACAATTCGGATTATTGGATTGGATTCTGCATACATATACACACTCATTTTCTGTACTT
CTGGGAGTATGTACTCTCAGATTCAGTTAAAGTAGTACCATATACACAAATGTATTATAC
CACTTTATCATTCTCAATATACCTTATTACTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK353964	1007	0.0	16 - 1007	99	987 / 992	CUST_18087_PI390587928	ABC05753 ABC05754
MLOC_71503.1	2297	0.0	163 - 778	99	611 / 617	CUST_18087_PI390587928	ABC05753 ABC05754
AK251494.1	885	4e-143	12 - 290	99	278 / 279	CUST_18087_PI390587928	ABC05753 ABC05754
MLOC_49375.1	241	1e-77	61 - 241	96	174 / 181	None	ABC05754
MLOC_32615.1	165	5e-67	1 - 163	95	155 / 163	None	ABC05754
MLOC_76483.1	146	2e-65	5 - 146	99	140 / 142	None	ABC05754
MLOC_33871.1	132	4e-63	1 - 132	100	132 / 132	None	ABC05754
MLOC_29655.1	196	7e-61	63 - 196	99	132 / 134	None	ABC05754
MLOC_33881.1	151	2e-56	1 - 137	96	133 / 139	None	ABC05754