barSeed - Barley Seed Development Database

Probe ABC05553

Source Contig ABC05553

barSeed

Links

Affymetrix Source Sequence (1463 bp)

>ABC05553 1463
ACCCCAAAGCCGTTCACGTGCACGCTCGTCCTTCCGGCGCCCAACGGAACGGCAGCAGCC
GAGCACCGGCATAAATACCTCCCGGCCTCCCCGCCCCCGTGTCCACCGCACACACAACCC
ACACCCACACCTAGCTAGCTTCACGAGGAGGGAGAGAGAGAGAGAGCTAGCAGAGACATG
GCGGCAGCTGAGGCTCAGGGCGGTGGGGCGGCGGCGGCGGGGGAGGAGGAGGGGGCGATC
AGGCACAGGACGGTGACGGCGAACGGGATCGCGATGCACGTGGCGGAGTCGGGGCCGGAG
TCGGGGCGGGCGGTGCTGTTCCTGCACGGCTTCCCGGAGCTGTGGTACTCGTGGCGGCAC
CAGATGGCGCACCTCGCCGCGCGGGGCTACCGGTGCGTGGCGCCCGACCTCCGCGGCTAC
GGCGGCACGGAGGCGCCGGCCGACGTCGCGTCCTACACCGCCTTCCACGTCGTCGGCGAC
GCCGTCGCGCTGCTCGACGCCCTCGCCATCCACAAGGTGTTCGTGGTGGGTCACGACTGG
GGCGCCATCATCGCGTGGTACCTGTGCCTCTTCCGGCCGGACCGGGTGACGGCGCTCGTC
AACACCAGCGTCGCCTTCATGCGCCACGTCTTCATCCGCGCCGGCGCCGGCGCCGTCAAG
ACCACCGACTACTTCAACCAAGCCTACGGCCCGACCTACTACATCTGCCGCTTCCAGGAG
CCCGGGGTGGCGGAGAAGGAGTTCGCGCCGGCGCACGCGAGGCACCTCATGACGCGCATC
CTGAGCGACCGCTTCAGCGAGCGCGCGGCCGGCAAGGAGACGACGGAGGACGCCACCGTC
GAGGCGGCGGCGCTCCCGGCGTGGCTCACGGAGGCGGACATCGACTACTTCGCGGCGGCG
TTCGAGAAGACGGGCTTCACGGGCGCCATCAACTACTACCGCAACATGGACCGGAACTGG
GAGCTGGCGGCGCCGTGGGCGGACGCCAAGGTGACGGTGCCGACCAAGTTCATCGTGGGG
GACGGCGACCTGACGTACCACTACGCCGGGATCCAGGACTACCTGCACAAGGGCGGGCTC
AAGGCCGACGTGCCGCTGCTGGAGGAGCTGGTCGTCGTCCCCGGCGCCGGCCACTTCATC
CAGCAGGAGCGGGCGCAGGAGGTCAGCAACCACATCTACGACTTCATCTCCAAGTTCTGA
ACAACATCTGAGAAGGAAAAAAAAAAAAAAAAACCAGCCGTGCGTCACGTTTTCGGTAGA
CCAGTTTGATCATCGTTCGACGCGTGTTATCGTTTCCTACTTTCATTTGTTGCTCAAATC
GACCTCTCAGTTCATCTCATCAGTTGCCGTGGATAATAATCGCTCTGCTCGATCGACGGA
GCTGTGTCTGTGTATGCCCATGTGTATTTCACGTCAGAATTCTTCTAAGACTTAATCAGT
GGGGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360462	1462	0.0	15 - 1461	97	1407 / 1452	CUST_35388_PI390587928	ABC05553 ABC05554 ABC37826
AK365385	1424	0.0	2 - 1366	96	1320 / 1371	CUST_35388_PI390587928	ABC05553 ABC05554 ABC37826
MLOC_63331.2	1347	0.0	1 - 1059	99	1058 / 1060	CUST_35388_PI390587928	ABC05553 ABC05554 ABC37826
MLOC_63331.3	2381	2e-103	335 - 539	100	205 / 205	CUST_23576_PI390587928 CUST_28351_PI390587928 CUST_37880_PI390587928	ABC05553 ABC05554 ABC37826
AK358796	1276	2e-161	184 - 1074	78	701 / 895	CUST_41640_PI390587928 CUST_24559_PI390587928	ABC05553
MLOC_18633.1	497	2e-112	1 - 221	100	221 / 221	None	ABC05553
MLOC_63331.1	2372	9e-71	1 - 146	100	146 / 146	None	ABC05553