barSeed - Barley Seed Development Database

Probe ABC05498

Source Contig ABC05498

barSeed

Links

Affymetrix Source Sequence (1313 bp)

>ABC05498 1313
GAGAAGCCTGACGTCGACAGCAGTTCGTCGATAAAGAGGCATTTCTGCAGAAACCTCGAA
ACCCCGCGACCACCGCCTTGCCGCCTGCACAACCGAGTGCGCTGACCGACGACGCCTCCG
CCACCGCCTCTAGCCCCTCGCCGCGGTCGACCGACGCCCACAGCGTTACGATGGTGACTG
ACGCGGCCGCGTTGGCGGTCGTGAAGGCCGCGCGCCCCGTCTTCCGCGGCGCCCACGATG
GCGTCGCGTTTGCCACAAACGCCGCGTTCCTCGCCGCTGGATACTCTCTCTGCGCCGTTG
GTCCTGCCGCGCTTACCGACCCCCTGCCCGCAGTTGACGATGAGGTGGGAATTGATGGGT
GGAACAGTATGGATAATTGCTATGCCTTTTTGTACTCCAAGGAGGAGGAGGGCAAGAAGA
AGCGCATTTTAGTGAAATGTCTAGTGATTGATGACTTCCTTGCTATTGATGCGCTGGATC
TTGAGGCACAACACAAGGAACCCTGCAATGTCCAGATAAATGTGAAGGATTTCTTCTCTG
AAGAACAGCCCAAGAATTACAAGGATATGTACAAGAATTTTGCGGGCTTCATTAATACCC
TTAACTCAAGCTTATTGGTTGAATTGGATGGTAAGGATGCTGCTGCTGCCCAGAAGCCTG
ATGTTGAGAGCAGTTCATCAATAAACAGTTCTGAAAATGTTCTGCGGGATGCAAGGACTA
CCGAACCTGCTGGCCTGATTTATCCTCCAGTAGCTCCGTTTGGTCATGATGACACCTTCC
CTGCTCCTGGTGCAGGTTTCTACCCTCACAGTGGTGGTGCGGGTGGTAGTATGCACGTTG
GTCCAAATGATCCACGCTTCTTCCCTTCAAATCCTTTTCCTGCTCCTTTTGGTGGCCCTG
GGAGTGTTCCACCTGGTGGCCGTTACGATCCAATTGGCCCGCCCGATGTTCCAGGATTTG
AACCATCTCGCTTTGTAAGGCGTTCGAGGCATCCAGGTGGAAGCACTCACCCAGACCTCG
AGTTCTTCCAGCAAGGCCCAGACTTCTGAGACTCAGCTTCATACCAACCTCCACCTGCAC
CCTGCGCTGAATGACTCTGCTTTGTTTCTGCTGTGCTCCTGAACTTTGTTGCAGTAGACC
CTGCTTGGGAAGTTGGGAACATGAACGTAAACTTCTGTGTTCACCTTCCAGACAATGCTT
TGTAACGGTTGCCTCTACAATTGTATATAGACCTGTCTTCGTATCAAAAAAAAAAAAAAA
AACTGTGCTTCTTACCTAAACTACTATTGGTGCGTCTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252139.1	1234	0.0	4 - 1234	100	1231 / 1231	CUST_20164_PI390587928	ABC05498
MLOC_16157.1	762	0.0	31 - 762	99	731 / 732	None	ABC05498
MLOC_34989.1	923	0.0	383 - 895	100	513 / 513	CUST_20164_PI390587928	ABC05498
MLOC_67735.1	1529	8e-131	1051 - 1439	88	352 / 398	CUST_20163_PI390587928	ABC05498
MLOC_67735.2	1479	8e-131	1033 - 1421	88	352 / 398	CUST_20163_PI390587928	ABC05498