barSeed - Barley Seed Development Database

Probe ABC05313

Source Contig ABC05313

barSeed

Links

Affymetrix Source Sequence (734 bp)

>ABC05313 734
CCTTGAAGGTGGCAGTGCATTCACCAAGGCATTCGGGGCGTCCTGGTTCGACTACGCCGG
CACGGATGCGCGCTTCAACTCCGTCTTCAACGAGGCCATGAAGCAACATTCTGTGATCAT
CACCAAGAAGCTCCTCGAACTGTACACCGGTTTCGACGGCATCGGCACCCTGGTGGATGT
CGCCGGCGGCGTGGGTGCTGTCGTCCACACCATCACCAAGAAGTACCCGAGCATCAAGGG
GATCAACTTCGACCTTCCCCATGTGATCTCCGATGCACAGCCTTGCCCTGGCGTGGAGCA
CGTCGGCGGCGACATGTTCGAGAAGGTGCCCACCGGAGACGCCATCCTCATGAAGTGGAT
CCTCAACTGCTTTAGCGACGACGAGTGTGCCATCCTGCTCAAGAACTGCTACGACGCACT
GCCGGCGCATGGTAAGGTGATCAACGTGGAGTGTATCCTGCCGGTGAACCCGGACGCCAC
AAACAGCACGCAGGGGTTAATCAGCGTGGACGTGAGCCTGCTGGCGTACAGCCCCGGCGG
CAAGGAAAGGTACCTGAGGGACCTCGAGAAGCTCGCCAGGGCTGCCGGGTTTACCGGCGT
CAAGGCCACCTACATCTACGCCGACTTCTGGGCAATGGAGTACACCAAGTAGCGAGGTCA
CAGCTCGTATAGCATGCTGCTGTGTTCTTGCTACCAGCTCAATTTCTAATAAATCTTAAT
CGACCGTAAGAGGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75528.1	1343	0.0	513 - 1246	100	734 / 734	CUST_3875_PI390587928 CUST_17584_PI390587928	ABC05311 ABC05312 ABC05313
MLOC_76018.2	1396	0.0	504 - 1155	88	577 / 653	CUST_3878_PI390587928	ABC05311 ABC05312 ABC05313
MLOC_76018.1	1925	0.0	995 - 1646	88	577 / 653	CUST_3878_PI390587928	ABC05311 ABC05312 ABC05313
AK373701	1394	1e-180	563 - 1231	84	563 / 669	None	ABC05312 ABC05313
MLOC_73307.1	1497	2e-153	553 - 1194	82	527 / 643	CUST_39721_PI390587928	ABC02528 ABC02539 ABC05311 ABC05312 ABC05313