barSeed - Barley Seed Development Database

Probe ABC05272

Source Contig ABC05272

barSeed

Links

Affymetrix Source Sequence (853 bp)

>ABC05272 853
CAGATAGCCATGGGCGCGAGCATCTTCCCTATCTCCAACTATGGTGGCTCCCAATATGAT
ATCAACATTTTGGTATGGAAGGACCCGAAGGAGGGCAACTGGTGGCTGCAGTTCGGCAAC
GACTACGTGCTGGGCTACTGGCCGTCCTTCCTCTTCTCGTACCTGGCGGACAGCGCGTCG
ATGATCGAGTGGGGCGGCGAGGTGGTGAACACGGAGCCGGACGGCAGCCACACGTCCACG
CAGATGGGCAGCGGCCACTTCCCGGAGGAGGGGTTCAGCAAGTCGAGCTACTTCAAGAAT
ATCCAGGTGGTGGACTCGTCCAACAACCTCAAGGCGCCGAGGGGGATCGGGTCCTTCACC
GAGCAGTCCAACTGCTACGACGTGCAGAACGGCAACAATGGCGACTGGGGCACCTACTTC
TACTACGGGGGCCCCGGGAAGAACCCCAACTGTCCATAGCAAGAAATGTGATGAACTAAA
ATGCCATCCATGCCCTAACAAGACGACAACACGCACCCCCTTGACGCCCATGTATTGTCC
AGTAAATTAGTTCGTTCACACCTCTCTCTCTTCTTTTTCCATATTTTTTGTCTTGGTTTT
TGGTTTCAAGTTTTGGTTCGAGGAGTTGATTAATTTCTAGGTAAGGTAAGGCAAGTGTTT
GACATGTGGGTTTGTTCTCTGCCTCGGAGAGATGTTGGTCTGGGTTCCGTTCTGGGGAGG
AGTGTGGTCAAGTTTCTGAAGAGAAACAGGCCTGTTTGGTTTGGGTTCTCTTGTGCCTCG
GATTATTCTATTCCTCCCATGGTCACCAACCAACCCCTCTGTTGAGTTGAGTGCATGTGT
GAGCACCAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_73598.1	1632	0.0	65 - 912	99	847 / 848	CUST_16426_PI390587928 CUST_9758_PI390587928	ABC05272 ABC05274 ABC05275
AK360353	1648	0.0	747 - 1597	99	846 / 852	CUST_16426_PI390587928 CUST_9758_PI390587928	ABC05272 ABC05274 ABC05275
AK357179	1758	0.0	1095 - 1758	99	663 / 664	CUST_16426_PI390587928	ABC05272 ABC05274 ABC05275
AK354787	2038	1e-127	1118 - 1566	85	383 / 450	CUST_9756_PI390587928 CUST_9757_PI390587928	ABC05272 ABC05274 ABC05275 ABC46916
MLOC_62411.1	1970	1e-127	1302 - 1750	85	383 / 450	CUST_9756_PI390587928	ABC05272 ABC05274 ABC05275 ABC46916