barSeed - Barley Seed Development Database

Probe ABC05087

Source Contig ABC05087

barSeed

Links

Affymetrix Source Sequence (1229 bp)

>ABC05087 1229
GGGCGCGACCACGGCGACGCCGATGCCAACGGCTTCGAGGGCGGCTACGGTGGCGGGGGC
GGCGGATATGCGGCGCCTCGGCTGGAGGACGGCGAGGGGAAGCAGGCGGAGAGGGGCCGC
GGCCCGCGCCAGCCCTACCGCGGAGGGGGCGGCCGCCGCGGGGGCTACTCCGATGGGCAG
AACACTGACGAGTTCGGGCGCCCGCACCGGTCCTACGAGCGCCGCAGCGGCACCGGCCGC
GGCTTCGGGATGAAGCGCGACGGCGCTGGCCGTGGCAACTGGGGGACTGCCACCGATGAA
GGGTTCCCGCAGGAAAATGTGGAGGCTGTCAACACTGAGGAGACCCCTGCTGTGGCAGAG
GATGCGAAGACGCCCGAGGATGCGCCGCTGCCTGAGGCTGAGAAGGTCAAGGAGGGTGCA
GAGAATGCAGAGGAAGAGAAGGAAGCTGAGGAAGATAAGGAGATGACCTTGGAGGAATAT
GAGAAAGTATTAGAGGAGAAGCGGAAAGCGATTCTCGCACTGAAGGCTGAGGAGAGAAAA
GTTGAAGTTGACAAGGAGCTGCAGTCCATGCAGCAACTGTCAGTGAAGAAGGATGCTGAG
GAAGTATTTATCAAGCTGGGCTCCGACAAGGAGAAGAAGAAAGACAATGCAGAAAGAGAG
GAGCGTGCCAAGAAGTCCCTCAACATCAACGAATTCCTGAAGCCGGCTGAAGGCGAGAGG
TATAATGGTGGTCGGGGCCGCGGCCGTGGCTTCAGGGGACGTGGCGAGCCCCGTGGCGGG
TACAACGGCGGAGGCGGTGGCAGGCGACCAGCTGCTGCTCCGGCGATCGAAGACCAGTCC
CAGTTTCCGACGCTAGGTGGGAAGTGAAGGGGTCCGTGTCCCGTGCCCTGATCCGACTAG
CAGCGGCTCCTCCGTTCACTCCAGACTGTGTCCTTGTTGAGTTGTTGGTACTCAGTAGTG
TGTTGTCGTTCCGCCCGTCTGTCTTTTTATCTGTCGCCGTGTCTTCGCGCCGTCTGTGTA
TCCCGTGTACACCGGAGGTGCACCCACCCACCTGTCGCCACCCGTGTCGTGTTCTAGCCG
CAGTTCATTCCGTTTATTTCGATAGGACAATGCTATGAGATGTTTTCCTGGTGCACTTAC
TGCTGTCATGTGTCTCCTGTGTGCTTGGTTCAGTGATTTTGCTCATCTGAGAATCGAGTC
ATCTTCTTTCTAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK365496	1627	0.0	442 - 1627	100	1186 / 1186	CUST_37333_PI390587928	ABC05087
MLOC_73596.1	940	0.0	1 - 940	100	940 / 940	None	ABC05087
AK367044	1070	0.0	394 - 1070	100	677 / 677	None	ABC05087
MLOC_73595.1	3632	4e-64	3499 - 3632	100	134 / 134	CUST_12431_PI390587928 CUST_8578_PI390587928	ABC05087 ABC20776