barSeed - Barley Seed Development Database

Probe ABC04979

Source Contig ABC04979

barSeed

Links

Affymetrix Source Sequence (1186 bp)

>ABC04979 1186
CAGGCGCCGCCGACGAGTCACTGACCGAGATGGCGAGCTCGGCGCTGAGACGATCCCTTC
CGCGGCGCGGCTTGCTCCGCCGCATCCTCCCTTCCCACCCAGCATCCGCCGCCACCTCCT
CGTTCCGTCGCTCCTTCCAGTCCGAAGAGGGCGCGGCAGGCGAGAGCACGGCCGACTTTG
AAAGGCGGGTGTTTGGAGACCAGAGGAAGCCAGATGACAACTCGTTCTTCGGGAAGCTCG
ATGGGGTTGGGGACTCCTTTGGAAGAAGACATGGCACAGGCTCTGGGATGGGTGTCTTCA
GTCAGCAGGGTGAGATGGGTAACTTTGGGTTGGGTGGGAGAAGTGGGTTATGTGTTCATG
GACGGTTTCGATTCCTTGAACGATGGCATGAACGAGAAATTGGATGACGCGGCCCGCACC
TTTCATATGACGGAGGAGGTTGAGGACGATGACTATGATTTCAGGCCAGATGTGAATTAC
AGGCGAGGCTCGACTTACAATGTCCGGGATCTTGACCTGACAAAACCTGCAGCCCCAAGG
AATCCTCCTAGACCTCAGTTTGAAACATCTACAAAGGAAGTTTTAAGTAAAGCTGATTTT
AGGAATGTTAGATTCCTCGCCAACTTCATTACAGAAGCTGGCATTATCATTAAGAGGAAT
CAGACCAAGATAAGTGCGAAAGCTCAGCGCAAGGTCGCGAGAGAGATTAAAACAGCTCGT
GCACTGGGGCTGATGCCTTTCACGACGATGGGCAAGAGGCCATTCATCTTTGGCAGAAGT
GCGGAGGAGGATGCTTCAGAAGAGGAATATGGGTATGAATTCGTCCAGAAGGATGCTGGG
CCTGAAGACACTGCTGGCGATGCTGTGCCCGATGTGGAGACCGCGTAAACAATCTGGAGC
TGTTGGTTATTTATAGAAAAAGAATCGCCTCTACTTAGTGCCTCGTGTTATGTACATTAC
ATTCTGTTTTTCCTCTGTAGTATGGATGCCTCTTGAGAATAATGGATGCTTACCCCCCGC
AAAACATGAAACAGTTGATAGTATTGACTTCTGGATAAGCTATTCCTCATTTTCAGGTTG
CTTCTCTCCAATTCTATGGTTACCACCTTAGGCATAATATCAAGCCCTTCTAAACAAGGC
ACCATTATGAATGTACAACAGTTCAGAACATTTTATAAGTTGACAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15148.1	1282	0.0	80 - 1260	99	1179 / 1182	CUST_28336_PI390587928	ABC04979 ABC04981 ABC04982 ABC04983
AK376423	1077	0.0	15 - 857	83	737 / 889	None	ABC04979 ABC04981 ABC04982 ABC04983
MLOC_6356.1	949	2e-112	294 - 848	80	482 / 601	None	ABC04979 ABC04982
MLOC_20876.1	545	3e-95	162 - 450	89	256 / 289	None	ABC04979 ABC04981 ABC04982 ABC04983