barSeed - Barley Seed Development Database

Probe ABC04907

Source Contig ABC04907

barSeed

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Affymetrix Source Sequence (893 bp)

>ABC04907 893
ATCCATGAGATCAGGAGCACGCTTGACAGTCACACCATCCTCAAGACTACCCTGGTTGGG
CTCGGGAGGACGTTGGGTCTGGAAGAATGTGCTTTGTGGATGCCGTCGAGGAGCGGTTCG
AGCCTTGAGCTAACTCATACCCTGCGCCACCCGACCCCCGCGGGCTCATCTGTGCAGATT
AATCTCCCTGTTGTCAACCAAGTCTTCAGTACCAACCGGGCGATCATAGTGCCACATACT
TCTCCTTTGGCGAGGATCCGCACTGTTCAAGGGCGGCATGTTCCACTCGATGTGGCTGCC
GTAAGAATCCCGCTGCTGCATCTTTCAAACTTTCAGCCCGAGCTTTCGGCGAAAAGCTAC
GGAATTATGGTTTTGATACTCCCATCTGATAGTGCAAGGAAATGGCTTGCTCATGAACTC
GAGCTCATCGAGGTCATCGCCGATCAGGTAGCTGTTGCCCTCTCCCATGCGGCAATTCTT
GAAGAATCAATGCGAGCACGTGATCTACTAACGGAGCAAAATGTCGCCCTAGATTTAGCT
CTGCGAGAGGCTGAAATGGCAGACAACCGCGCTACCACCGACTCATCTGCTTCTGCAGCC
AAGGTGCACAACGCCGACCCATGATCGACGCGTTTTCCCCAACTTCGCCCGACACCGCTG
TTGTTTTTTTACCCACCCAATGCAAGTATGCCTCGATCCAAGTCCTACTCCCTAGTTGCC
TTTGCTTGCACCCTATAGGTGCCCCAAACTGTTTCCTTTCGTGCTGCTGTTACAGCACTA
TTTATCTGAACCTATGTAGTTTAAGTTTGGCCCTGCTGTGGCAACCTACCCGGATTTGTG
CTAAGTTATGTGCTATCTATATAGAAACCTGTGCTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251312.1	1560	0.0	685 - 1546	98	847 / 867	None	ABC04906 ABC04907
MLOC_64546.1	2261	0.0	1551 - 2261	99	707 / 711	None	ABC04906 ABC04907
MLOC_64546.2	2419	0.0	1551 - 2235	99	681 / 685	None	ABC04906 ABC04907 ABC44356
MLOC_64546.3	1547	0.0	767 - 1369	100	603 / 603	None	ABC04906 ABC04907 ABC44356
AK250968.1	2592	2e-170	716 - 1286	86	491 / 571	CUST_34869_PI390587928	ABC04906 ABC04907 ABC07187 ABC15665
MLOC_59177.1	1339	7e-130	1 - 426	87	370 / 426	CUST_34869_PI390587928	ABC04906 ABC04907 ABC07187