barSeed - Barley Seed Development Database

Probe ABC04890

Source Contig ABC04890

barSeed

Links

Affymetrix Source Sequence (1053 bp)

>ABC04890 1053
GGGTGGGCACGAGGGCACAGCACTGCTCCACTTCGCCTTCTCCTCCAAGCCACGAACTCC
GGCGACTCCCCACCACCAGCCCCCCGAGCAGCCCGCCCACTCCGACCACCGCCATGTCGA
GGCGCGGCGACTGGGTCTACGAGAACAACGGCGGGACCTGCGTGGCCATCGCCGGCGCGG
ACTACTGCGTGGTCGCCGCCGACACCCGCCTCTCCGTCGGATACAACATCCTCACGCGCG
AGCACTCCAAGATCTGCGAGCTGGCCGATAAATGTGTAATAGCATCTTCTGGCTTCCAAG
GTGACATCAAAGCTCTACAGAAGAACTTAGCAGCCAGAGAACTGCTATACCAGCACCAGC
ACAATAAAAGGATGAGCTGCCCAGCAATGGCACAATTGCTCTCCAACACCCTGTACTACA
AGCGATTCTTCCCATACTATGCTTTCAATGTGCTTGGTGGGCTCGACAGTGAAGGGAAAG
GATGTGTCTACTCATATGACGCTGTTGGGTCCTATGAGAGGACTGGTTACAGTGCACAGG
GATCAGGATCTACCTTGATCATGCCAGTGTTGGACAACCAGCTGAAATCACCTAGTCCAC
TATTAGTCCCTGCAAGAGATGCCGTCACCCCTTTGTCCGAATCAGAGGCGGTCGACCTAG
TTAAGGATGTCTTTGCATCCGCAACTGAGAGGGACATCTACACTGGGGACAAAGTGGAGA
TTGTAGTCATCAACAAAGCTGGGACGAGGCGTGAGTACATTGAGTTGAGGAAGGACTAAG
CTTGCGCTGCTGCAGTTGCCATTTGCTTCCCTAGATATAGGGAATTATTATGCCCAGAGC
TGCTACTTTGATAGAAACACCCGTGCTTGCTTTGCTTCCGTGCTGTACCAGGATCGACCC
AGCTTGCTTTGTTGAACTAATTTGTTGTTTCATGCATATGAGATGCTGAGTTATTTGTTG
AAAAAAAAAAAAAAAAAGTACGTTCATGATAACCCACAAAAAATACTCTCATCAGGGCAT
CTTGAACAGCAGGCCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_56084.1	1113	0.0	93 - 1113	99	1015 / 1027	CUST_4687_PI390587928	ABC04890
AK251352.1	3377	4e-118	3147 - 3377	100	231 / 231	None	ABC04890
AK250295.1	855	5e-107	2 - 215	99	213 / 214	None	ABC00717 ABC00824 ABC00845 ABC00871 ABC00959 ABC00972 ABC04890 ABC40733 ABC50827 ABC53018