barSeed - Barley Seed Development Database

Probe ABC04844

Source Contig ABC04844

barSeed

Links

Affymetrix Source Sequence (822 bp)

>ABC04844 822
GGTTAGCACCCACATGGGGGAGAACAACCCGCAGTTCCTGGCCGGGGATCATTCGGTGCT
GCAGGTTATCGGCAAGGAGATCGTGGCGCTGGCGCTGGGGCAGAAGAACACGACCGTCGT
GGAGAAGCTGCTGTCGGCGAAGAGCGGGTCGACCATAATGGCGTGCATCTCGTGCGCGGA
GGAGCTGGAGAGGAAGGCGGAGCAGGAGGAACATGAGGGCGGGAAGGGGGAGCGCGAGAG
GGAGCGGGAAGAGGAGGAAGAAGGCGGCGGAGGCCAAGGCGGAGGAGGCGGTGATGATCC
AAGGGAGGAGGAAATACAGCGGAGGAGGGAGGAGGAAGAAGAAGGCGGAGGACGAGGAGA
CGATCCGAGGGAGGAAGAGGAACGGAGGAGGGAGGAGGAAGGAGGCCGTGGCGGAGACGA
CCCGTGGGAAGAGGAGGGAGGCGACTGGGGAGACTCCACCAAGTACCGCGCCGCCATGGC
CACGAACCTGAAGAAGCGCTACCGTGGTCGCAAGGGCTCCGTGTTCCGGAGCGCCTGAAA
ACAAGAACCGTTCCGGTCACCTTGCACGCTCTATGATCTACCCTTTCCCTGCGTACCGCT
GTACTAATAATGGCGGCGATCCTGGTCGCGTGGGTCTGTTGTTCAGTCTACTGTTCTTTT
AGTTTTCTTGCGTCCGTCGTTGCCACTGTGCCTTGCTGTAGCTGGTGTATAGAAGAAGAG
CTTGTGCATTATGCCTACGTATAATAAAATAAAAGGGCTGTTCATCGCTAAAAAAAAAAA
AAAAAACGCGATTTTTAATTCACAAAAAAAAAAAAAAAGGGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373549	2356	8e-134	1357 - 1767	88	370 / 419	CUST_18099_PI390587928 CUST_23199_PI390587928 CUST_41960_PI390587928	ABC04844 ABC14532 ABC17612
MLOC_6855.2	542	0.0	1 - 414	98	404 / 414	CUST_18099_PI390587928	ABC04844
MLOC_6855.1	332	1e-142	1 - 331	95	315 / 331	None	ABC04844
MLOC_17049.1	1729	1e-81	1558 - 1729	99	170 / 172	CUST_23199_PI390587928 CUST_41960_PI390587928	ABC04844 ABC14532 ABC17612