barSeed - Barley Seed Development Database

Probe ABC04793

Source Contig ABC04793

barSeed

Links

Affymetrix Source Sequence (855 bp)

>ABC04793 855
GTTCCTTCCAAGTTCCCCCCATTCCCACGGACAGGCACACCGACCCACGCGCATCTCGCC
GCCCGCCCGCCCGCCCGGGGAGCTCCGCCGATCCGCCCGCCCGCCCGCCCTCCCTCCCTC
CGCGCCCGCAAACGATGGAGGAAGCCAAGGTTGTGGAGACCAGGGATGGGACTATCTCAG
TTGCCTCCGCGTTTCCCGGTCATCAGGAAGCCGTACAAGATAGGGATCACAAGTTCTTGT
CGAAAGCGGTAGAAGAGGCTTATAAAGGAGTTGACTGTGGACATGGAGGCCCATTTGGTG
CGGTCGTCGTCCGTAATGACGAAGTAATAGTCGGTTGCCATAACATGGTTTTGAACAACA
CCGATCCAACTGCACATGCTGAAGTCACTGCAATAAGAGAGGCTTGCAAAAAGCTTGGAA
AGATTGAGCTGTCGGATTGCGAAATGTACGCATCATGTGAACCTTGCCCAATGTGTTTTG
GGGCTGTTCATCTATCCCGGATCAAGAGGCTGGTGTATGGAGCCAAGGCAGAAGCTGCTA
TTGCCATTGGATTCGACGACTTCATTGCTGATGCTCTGAGAGGAACTGGGTTTTACCAGA
AGGCCAACATGGAGATTAAGCGAGCCGATGGGAATGGAGCCCTGCTTGCTGAACAAGTCT
TTGAGAACACCAAAGAGAAGTTTCGAATGTACTAATATGTAGCAACGACATGGTAGAATT
TTACATCATGAAAGACCTTGATGCTCAGAAATAATAATGTAATTGTCAACATTGTCATTG
GCCATGGACTACAAACTATCGATTTGAATATACCATTTGATTTATCATTATGCTAAAGAA
AAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367079	859	0.0	19 - 859	95	801 / 841	CUST_29361_PI390587928 CUST_29360_PI390587928	ABC04793 ABC17590
MLOC_13212.2	697	0.0	1 - 697	99	694 / 697	CUST_29361_PI390587928	ABC04793 ABC17590
MLOC_13212.3	1498	0.0	720 - 1404	99	682 / 685	CUST_29361_PI390587928	ABC04793 ABC17590
MLOC_13212.1	591	1e-147	1 - 290	99	288 / 290	None	ABC04793