barSeed - Barley Seed Development Database

Probe ABC04610

Source Contig ABC04610

barSeed

Links

Affymetrix Source Sequence (952 bp)

>ABC04610 952
TGCGTACGTGTACGTGTGCGGGAGAGGTGCCGCGGACGCGGCTGTGCAGCGCCCCCTCAG
GCAGTCAGCACGCCGAGGATAAGGTGAGATAAAAGGGAGCCAGAGGCGCGGGTGTGCGGC
CGAGCAGCAACGGTGGAACTACTCCGCAACCATGGCGCCAGCAGCCCTGTCGGCCACCGT
CCTTCGCGTCTCTGCCGGTGTTAGGACCGCCGTCGCCGCACCCGCCGGCGTACTCCGGTT
TGGCAAGACGGCTTGCCTGCACTCCGGCCACTCTGGCCAAGCTGTGCTGCGATCGAACGC
GCTGCAGCTGAGGCCCGTGGGACAGAGGAGGCGCTCGGCGCTGAGAAGCAGCGTGGATGA
CTCCAAAGCCACGGATGACAAGGTGGAGTTCGGGTACTCGAGGAAAGACGTGCTGCTGAT
CGGCGTCGGCGTCACCCTCCTCGGCTACGGCCTCAAGTCTGGCCTCGAGTTCCTCGGCGT
CGACCCCTTGCAAGCCGGCAACGTGGTCCAGCTCTTCATCGTGCTCGGGATGACGGTAGG
GTGGATCTCCTCCTACATGATCCGGGTGGCCAACAAGGACATGACCTACGCCACGCAGCT
CAGGAACTACGAGAAGCAAGTCATGGAGAAACGGCTGGAGAGCCTGTCGGAGGCGGAGCT
GCAGGTGCTGCTGGAGCAGGTGGAGGAGGAGAAGGAACGCCTGCCGCCGATGAGGAGGGA
TCAGGGTATCACCATCAACAGGAAGACGGAGGATCAAACCACTGCCAACTGATAGCTAGA
ACACCTCGATAATGATACTAGCCCAGTACACACTGTTAGGATAGCTTGCATCGATGTATT
ACGGCTTTTCCTTTGTTATAAGAATCTGTAGCACAATGTAGTGCTCTTAGCAGCAGCACT
GAGTGTTATACTCCCAAGAATAGTTACCAAGATTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_38413.1	2497	0.0	49 - 997	98	928 / 949	CUST_6925_PI390587928 CUST_13377_PI390587928	ABC04610 ABC19934
MLOC_38414.1	867	0.0	2 - 830	98	810 / 829	CUST_13377_PI390587928	ABC04610
MLOC_38414.3	1020	9e-129	2 - 268	98	262 / 267	None	ABC04610
AK251582.1	515	0.0	77 - 515	97	425 / 439	CUST_13377_PI390587928	ABC04610
MLOC_38414.2	1637	1e-77	431 - 591	99	160 / 161	CUST_13377_PI390587928	ABC04610
MLOC_38413.2	2809	1e-77	421 - 581	99	160 / 161	CUST_6925_PI390587928 CUST_13377_PI390587928	ABC04610 ABC19934