- Probe ABC04452
- Source Contig ABC04452
Affymetrix Source Sequence (2010 bp)
>ABC04452 2010 AGTTGCCACGGCTAGTGTATGTCTCTCGTGAAAAGAGACAGGTTTCCAGCATCACAAGAA GGCTGGTGCAATGAATGCACTGATTCGCGTATCTGCTGTGTTGACAAATGGTGCCTATCT TCTTAATGTGGATTGTGATCACTACTTCAATAGCAGCAAAGCTCTTAGAGAAGCAATGTG CTTCATGATGGATCCCGCTCTAGGAAGGAAGACTTGCTATGTCCAATTTCCACAAAGATT TGATGGCATTGATTTGCACGATCGATATGCTAATCGCAACATAGTTTTCTTTGATATCAA CATGAAAGGTTTAGATGGCATTCAGGGTCCAATGTATGTCGGGACAGGATGCTGTTTCAA CAGGCAGGCCTTGTATGGCTATGATCCTGTATTAACTGAGGCTGATTTGGAACCTAACAT TGTTGTTAAGAGCTGCTGCGGTGGCAGAAAGAAAAAGAACAAGAGCTATATGGATAACAA AAACCGCATGATGAAGAGAACTGAGTCTTCTGCTCCCATCTTCAACATGGAAGATATAGA AGAGGGTATAGAAGGTTATGAGGATGAAAGGTCGATGCTTATGTCCCAGAAGAGATTGGA GAAACGATTTGGCCAGTCTCCTATATTTACTGCATCCACCTTTATGACTCAAGGAGGCAT ACCACCTTCAACAAACCCAGCTTCTCTACTAAAGGAAGCCATCCATGTCATCAGCTGTGG ATATGAGGACAAAACCGAATGGGGAAAAGAGATTGGCTGGATCTATGGTTCAGTTACTGA AGATATTCTTACTGGGTTTAAAATGCACGCAAGAGGTTGGATATCAATCTACTGTATGCC ACCACGGCCTTGTTTCAAGGGTTCTGCGCCAATCAATCTGTCTGACCGTCTTAATCAAGT GCTGCGATGGGCTCTCGGGTCAGTTGAAATTCTGTTTAGCAGACATTGTCCTATCTGGTA CAATTACGGTGGGCGGTTGAAACTTCTGGAGAGGGTGGCTTACATCAACACCATTGTTTA TCCAATAACATCCCTCCCACTTATCGCCTATTGTGTGCTTCCTGCTATCTGCCTCCTCAC CAACAAGTTTATCATTCCTGAGATCAGTAATTATGCTGGGATGTTCTTTATTCTCATGTT TGCGTCCATTTTTGCCACTGGTATATTGGAGCTCCGATGGAGTGGTGTCGGCATCGAGGA CTGGTGGAGAAACGAGCAGTTTTGGGTCATTGGTGGCACGTCTGCCCATCTTTTCGCGGT GTTCCAGGGTCTGCTCAAGGTGCTGGCTGGGATCGACACCAACTTCACGGTTACCTCCAA GGCAAACGACGAGGACGGCGACTTTGCAGAGCTATACGTGTTCAAGTGGACCAGTCTCCT CATCCCTCCGACCACCGTCCTCGTGATCAACCTGGTGGGCATGGTGGCAGGCATATCATA CGCCATCAACAGCGGTTACCAATCCTGGGGCCCGCTCTTTGGAAAGCTCTTCTTCTCAAT CTGGGTGATCCTCCATCTCTACCCCTTCCTCAAGGGTCTCATGGGGAAGCAGAACCGCAC GCCGACCATCGTCATCGTTTGGTCGATCCTCCTCGCCTCCATCTTCTCCCTCCTCTGGGT GAAGATCGACCCTTTCATTTCCGATACCCAGAAGGCCGTTGCCATGGGGCAGTGCGGCGT CAACTGCTGATCGGATCATCGGCGCTCGGGAGTATCTGCCCCCCTAGTGTAAATACCGGA GGGGGTTAGACGGGATTTTTTGGTTGTAGATGAAGACGGAAGGATTTTTATCTAAATTAT TGCCCCTTTGTTAGTCGCCCCATGCCGCTGAGAACCACTGTCTACGAAACCTGCAGTGTA CATTGTGATTTTTTTCTCCTTTTTTTTGCCCCCATTTGTGGTACCTGTTCTTTGTTGCTT AGAGTATATCATGTCAGAATTGTATTTATACACTATGACACCAACTATTTATATAAGGCA GCTGTTGCATCAAAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK367031 | 2919 | 0.0 | 917 - 2910 | 99 | 1990 / 1994 | CUST_29604_PI390587928 | ABC04451 ABC04452 ABC35040 |
| AK354566 | 3543 | 0.0 | 1736 - 3543 | 99 | 1803 / 1808 | CUST_27906_PI390587928 | ABC04451 ABC04452 |
| MLOC_55081.3 | 1692 | 0.0 | 1 - 1643 | 99 | 1640 / 1643 | None | ABC04451 ABC04452 |
| MLOC_64555.1 | 3913 | 0.0 | 83 - 2065 | 94 | 1881 / 2009 | CUST_29603_PI390587928 CUST_29605_PI390587928 CUST_27906_PI390587928 | ABC04451 ABC04452 |
| MLOC_64555.2 | 3569 | 0.0 | 62 - 2044 | 94 | 1881 / 2009 | CUST_27906_PI390587928 CUST_29603_PI390587928 CUST_29605_PI390587928 | ABC04451 ABC04452 |
| MLOC_64555.3 | 3772 | 0.0 | 1 - 1916 | 94 | 1824 / 1942 | CUST_27906_PI390587928 CUST_29603_PI390587928 | ABC04451 ABC04452 |
| AK357056 | 3387 | 0.0 | 1520 - 3387 | 94 | 1779 / 1889 | CUST_29603_PI390587928 | ABC04451 ABC04452 |
| MLOC_55081.1 | 2174 | 5e-100 | 1480 - 1678 | 100 | 199 / 199 | CUST_29604_PI390587928 | ABC04451 ABC04452 ABC35040 |
| MLOC_55081.2 | 816 | 1e-85 | 636 - 814 | 99 | 177 / 179 | CUST_29604_PI390587928 | ABC04451 ABC04452 ABC35040 |
| AK366571 | 3845 | 4e-105 | 2408 - 3346 | 74 | 704 / 948 | None | ABC03276 ABC04451 ABC04452 ABC41049 ABC46383 |
| MLOC_62778.2 | 2351 | 4e-105 | 918 - 1856 | 74 | 704 / 948 | None | ABC03276 ABC04451 ABC04452 ABC41049 ABC46383 |
| MLOC_62778.1 | 2536 | 4e-105 | 941 - 1879 | 74 | 704 / 948 | None | ABC03276 ABC04451 ABC04452 ABC41049 ABC46383 |
| MLOC_63621.1 | 2268 | 8e-58 | 1 - 133 | 98 | 130 / 133 | CUST_40847_PI390587928 | ABC04451 ABC04452 |
| MLOC_63621.2 | 2201 | 8e-58 | 1 - 133 | 98 | 130 / 133 | CUST_40847_PI390587928 | ABC04451 ABC04452 |