barSeed - Barley Seed Development Database

Probe ABC03876

Source Contig ABC03876

barSeed

Links

Affymetrix Source Sequence (731 bp)

>ABC03876 731
GACCCAACAACCCCCCTCACCCTCTCGTCCCCCTCTTCTTCCCTTCCCTTCCTCGTCCCT
TCCAGGTCACGACGCTACCCCCAAATCCCCAGCCTCCAGATCCACCCGCCGCCGCCGGCA
ACCCCGTCGCTTCCCGGCCCCTGCGCGCCCCAGCCAGCCAGGATGGCGCACGAAGAGGCA
CCATTTTACCCACGTGAGAAGCTTGTTCAGAAGCAGCAGTATTTCCAGAACTTGAGCAAG
CATATCCACCTTAAAGGCCGTTACGATGCGGTCATCTCCGTTGCCATTCCCCTTGCGCTT
GCTGGCTCCAGCTTGTTCATGATTGGTCGTGGGATCTACAACATGTCTAACGGGATCGGG
AAAAAGGAGTGAATTTCTGTCGGTTTTGCTAGTATCTCAGGAAGCGGCATGGAAGCGATA
CTGCCCAAGCTATGATGCCATCTTCGTTTGCAAATAATATTGTCAGAGAAAGACTGAGTT
CATTTCCAGTTCTCTTTTGTTGGTATTTGTGGATATTTGATGTCAGCAAATTGATGCTAA
ACTGGCAATGATGATTCTATAACATTGGCATCATTATCCTTTCTGTTAAAAAAAAAAAAA
AAAATTGTTTATGTTCTACGTTTCCTTTCAATTGATGTTTTGTTTGTGCATTCATGACAT
GATTTCTTGTCTGTGAATTCATGAGTTTGTTTGTATGGTACGCAGCAAGTTCCTAAAAAA
AAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_52848.2	621	0.0	15 - 603	100	589 / 589	None	ABC03876
MLOC_52848.3	523	0.0	2 - 523	97	508 / 522	None	ABC03876
MLOC_52848.1	1957	6e-80	1736 - 1897	100	162 / 162	None	ABC03876
MLOC_52847.4	3981	6e-80	3768 - 3929	100	162 / 162	CUST_28266_PI390587928 CUST_36867_PI390587928	ABC03876