barSeed - Barley Seed Development Database

Probe ABC03454

Source Contig ABC03454

barSeed

Links

Affymetrix Source Sequence (1067 bp)

>ABC03454 1067
GAATTGATGTCTTATTCTACCTTCTCCCTCTTTTTATATTTTTATTAGTTTGACAACTGT
GATGAGCCAATTTTACAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGTC
AAAGAACATCTAAGGGACTGAGTTGTCTTAGAAGATTAGATTTGTATCTTTAGCAGATTT
GATTGTTTTGTGTTTTTATCTGCTTCTCTTAACAGTATTCGTGCCTGTGAATTAACCTGT
ATGGTTCCCGGGCAATGATGAGGTGGGAAGCAAAGAGGAACGTTCCTCTCGCTATCCAGT
GCGGAATTTCTCGTGTTGCTATTGGACGTCGAGGAACTACACTTTCTTTCTGAATTTGAA
TTCGCTGGTTCTATAGCTGTTCCAGTTGAAGTTTGGTAACTCATTGATATTGTTGCTTTG
CATTCTTTCTTTGCACACAATATTAAACCCACATTGAGACTTGATTTTGATTTTGTTCTC
ACATTAGCGGATTTTGTTTCTGTGAGCACCGTTTCAGTACAGAAGAACCTCAGTGTGAAT
ATTGCAGCATGATGTGGGTGACTTGTTAATATTGTGGTTGCGCATTTCTAAACCTTGCCA
TTGCATCTTCTTTCCCACAGGCTAGAATCTTAGCCCTTAACGCATCATACTTCTTGAAGA
ATGGCGGCCACTTTGTCATTTCCATCAAGGCAAACTGTATCGACTCCACCCAGGCTGCTG
AGGCCGTGTTTGCGAGCGAAGTGGAGAAGCTCAAGGCCGACCAGTTCAAGCCATCGGAGC
AGGTGACCCTGGAGCCCTTCGAGCGCGACCACGCCTGCGTCGTCGGTGGTTACAGGATGC
CCAAGAAGCAAAAGTGAAGTTGAGGAGAAGAAGAATAGAAGTGGCCTTGTTGTTTCTGCA
ATCTGCTTTTGCTCAGATGTACTAGTAGCAGTAGTGGTAATGTGACCCAAGTGTATGGGG
TTTTGTGGAAACTCTCTGAGACGATTCCTGCTGTTTTACAGCAATTATGTTAAACTTTAT
TTGAGCAGAAAATGTTACTCCCTCTGTTCNAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_4782.1	1018	0.0	497 - 928	99	429 / 432	CUST_33977_PI390587928	ABC03454 ABC03456 ABC03457 ABC31801
AK372087	2659	0.0	2253 - 2659	99	405 / 409	CUST_30665_PI390587928 CUST_9879_PI390587928 CUST_33977_PI390587928	ABC03454 ABC03456 ABC03457 ABC16873 ABC31801