barSeed - Barley Seed Development Database

Probe ABC03350

Source Contig ABC03350

barSeed

Links

Affymetrix Source Sequence (1445 bp)

>ABC03350 1445
CGGAAACGCGCAATCCATCGTCCATCCATCCCTTCCCCCGCCCGACCTCGAGATCCCGCA
TCGCGTCGCGCGTCCGACCCCCCGGCACCGGCAGGCAGGCACCCGGTCCCGATGGCGACG
CTCAAGGTCCCCTCCAACGTCCCCGCCCTCGCCGACGACTGCGACAACCTCCGCAAGGCC
TTCCAAGGGTGGGGCACGAACGAGGCGCTCATCATCTCCATCCTGGGCCACCGCGACGCC
GCGCAGCGCCGCGCCATCCGCAAGCACTACGCCGACACCTACGGCGAGGAGCTGCTCCGG
AGCATCACCGACGAGATCTCAGGCGACTTCGAGAGGGCTGTGATCCTGTGGACGCTGGAC
CCCGCGGAGCGGGACGCGGTGCTCGCCAACGAGACCGCCAAGAAGTGGCACCCGGGGAAC
CCCGTGCTCGTCGAGATCGCCTGCTCGCGCGGCTCCGCGCAGCTCTTCGCCGTCAGGCAG
GCCTACCATGACCGCTTCAAGCGCTCGCTCGAGGAGGACGTCGCTGCGCACGTCACCGGC
GACTTCCGCAAGCTCTTGGTGCCACTTGTAAGCTCATACCGCTATGAGGGACCAGAGGTC
AACACAAGGTTGGCACATTCAGAGGCCAAAATACTGCATGAGAAGATCGAGCACAAGGCT
TACGGTGATGATGAGATCATCAGAATCCTCACCACCAGGAGCAAAGCTCAGCTGCTTGCA
ACACTCAATAACTACAATGACACATTTGGTCACCCAATCACCAAGGATCTGAAGGCTGAC
CCCAAGGATGAGTTCCTCAAAACCCTGCGGGCGGTTATCCGGTGCTTCACCTGCCCTGAT
AGGTACTTTGAGAAGGTTGCCAGGTTGGCCATTGCAGGGAATGGAACCGATGAGAACTCC
CTCACTAGGGTCATAACGACCCGCGCCGAGGTGGACCTGAAGCTGATCAAAGAGGCATAC
CAGAAGAGGAACAGTGTCCCCTTGGAGAAGGCCGTCGCAGGCGACACCTCCGGCGACTAC
GAGACCATGCTCCTTGCCCTCCTGGGGAAGGAGTGAGCCTTGCCTCTGTATCCACCCCCT
GTTATCCTTTTCATATCTCAAATCAGAGAATAAACCCTGGTATGCAAGGCCGTTTTCAAC
GCTGGTTATGATCTGCTGCGCCTTGCATAACGGTGAGAATAAGATAGAGAGAGGTGTGCT
TTACGATGAGTCATGCATGGTGATACGTTTTTGTACTAGCTTAGATGTTCATTCGCGTGT
GAAATGCAGTGGAGATGTTAAAAAAGTGAGTTTTCTGTAAGCCTGAAAAATCTGAATTGC
ATCTGTATTTTGCTTGAATTGAATCGAGTACATCAGTTCCTAAATCTTTTAAAGAGGGAG
AAGGTTATACTCCATCTGTTCCTAAATATAAGTCTTTTCAGAAGTTTCAAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_36316.1	1912	0.0	540 - 1912	99	1368 / 1373	CUST_22743_PI390587928 CUST_22741_PI390587928	ABC03349 ABC03350 ABC39376 ABC49906
MLOC_36316.2	1199	4e-154	2 - 306	99	302 / 305	CUST_22743_PI390587928	ABC03349 ABC03350 ABC39376 ABC49906
MLOC_51591.2	1513	0.0	505 - 1385	85	748 / 885	CUST_22742_PI390587928 CUST_22744_PI390587928 CUST_2901_PI390587928	ABC03349 ABC03350 ABC49926
MLOC_51591.1	3346	1e-64	2856 - 3077	87	194 / 223	CUST_22742_PI390587928 CUST_22744_PI390587928 CUST_2901_PI390587928	ABC03349 ABC03350 ABC49926