barSeed - Barley Seed Development Database

Probe ABC03315

Source Contig ABC03315

barSeed

Links

Affymetrix Source Sequence (692 bp)

>ABC03315 692
CTTCTCTTCTCGCCGTCTATATAAGCAGAGCCCGGCTGGATACGTGTGTCATCCACCACC
CCTTCCCATCCTGCTCTGCTCTGCTCAGCTCAGCTCAGCTCTGCTGCCTCCCCTCCATCC
ACCGAGTGAAAAAAGCTCTCCGTCCGCCGAAGGATCGACCATGGCGGGCACGGCCAACTG
CATCGACATCATCCTCGCCATCATCCTCCCGCCCCTCGGCGTCTTCCTCAAGTTCGGATG
CGGGCACGAGTTCTGGATCTGCCTCCTGCTCACCTTCCTCGGCTACATCCCGGGCATCAT
CTACGCCATCTACGCCATCACCAAGTAGAGCCGAGCCGTCCCGAGTATGCTCCGCAGCAC
AGTATTTTCAGGATGATGATCTCGTCTGTCTAGTCGTCCCTCCTTGCTTGTGTGGGTTCT
TTTAATTCTTTTCCGTGTATGCTGATGAAGTGATGATGCAAATTCCTCTGTGGTTTCCAT
GGACCATGTGAAGAAGCAGCAGCTTCTTTATGTATTATATATTTATATAAATGTATGAGA
GCACTCTTTGGTAAAAAAAAAAAAAAAAATCCGTGTGGAAGTCAGGAATCGGCCGTGATA
TGTATGTATTTCTCATTTGATTTCTTCAGTTCTTCTTCAGTAATATAAATAAGAGAAAAA
TATGTTTTTGGTTCAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60357.1	666	0.0	167 - 666	99	495 / 500	None	ABC03173 ABC03175 ABC03314 ABC03315 ABC37048 ABC37597
AK357653	780	8e-54	344 - 506	90	147 / 163	CUST_21041_PI390587928 CUST_21039_PI390587928	ABC03173 ABC03175 ABC03315 ABC37597
MLOC_77536.1	800	8e-54	187 - 349	90	147 / 163	None	ABC03173 ABC03175 ABC03315 ABC37597