barSeed - Barley Seed Development Database

Probe ABC03175

Source Contig ABC03175

barSeed

Links

Affymetrix Source Sequence (996 bp)

>ABC03175 996
CTAAAATCACTTTTGAAATCAGAGCCTGATGTGAAAGTCGAAGATATTGATCACACTGCT
GAGCTAGTTGTCCTTGCAAGCGATGGAGTTTGGAAGGTAATGAACAACCGGGAAGCAGTT
GATGTGGTGAAAAAATACAAGGACCCACAAACAGCTGCCAAGCAATTAATCGCCGAAGCG
GTGAAAAGAGACAGTAAAGATGATATATCATGCGTAGTTGTTCGGTTCAAGATGTAAATT
TGTTGCAGGTAACTCGTGAAGAATTGTCACCGAGAGCAGAAGGAATTATAACAGCAAAAC
ATCGCCTGCCTGACAAGGATAGTGGTAATGCAAAAGAATAATACTCTGGAATGCTGGCTG
TAAATGATGTGTTAGTTCGATTGTAAGTTGATATATAAATATGCTAGAATTCAAGCCACC
TCTAGCCGTCTCGCTCTCCTAGTTTCTTCCATCAACCTCCTCTCCTCTCCTCTCCTCTCG
CCTCGGGTTCTCCCTTCGACTGCTTCGAGACAAGGAAGGAAGATGGCGGACGAGGGGACG
GCCAACTGCATCGACATCATCCTCGCCATCATCCTGCCGCCGCTCGGCGTCTTCTTCAAG
TTCGCCTGCGGGATCGAGTTCTGGATCTGCCTGCTGCTCACCTTCTTCGGCTACCTCCCC
GGCATCATTTACGCCGTCTGGGTCATCACCAAGTAGCCGCCCCTGCCTGCCTGCTTGTCT
CTAGGTGATCCATGGCCAACTTGTTCCGTTTGTCCGAGACGCGAGCCAGGTGATCCATGG
TGCTGCGTACGCGTTGTGTGTTCATGCTGTTGTACATCTGTTTGTTGTTCTTGCTTGATG
ATTAGACTCCTCTCCTCCTGTCGCCTTCCCCAGTGTATCCATGCATCCAGTTGTTCCTCT
GTCCATTTTCGTCGTCCATGTACTTTGATGAATTAATTAATTAATCAATTGATTGGTGGA
GAAATTTCCCGATTGTTAAAAAAAAAGAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK357653	780	0.0	226 - 780	98	543 / 555	CUST_21041_PI390587928 CUST_21039_PI390587928	ABC03173 ABC03175 ABC03315 ABC37597
MLOC_77536.1	800	0.0	1 - 467	99	466 / 467	None	ABC03173 ABC03175 ABC03315 ABC37597
MLOC_59226.2	1585	0.0	969 - 1380	100	412 / 412	CUST_37586_PI390587928	ABC03172 ABC03175
MLOC_59226.1	1681	0.0	1040 - 1451	100	412 / 412	CUST_37586_PI390587928	ABC03172 ABC03175
MLOC_77536.2	536	1e-52	309 - 430	98	120 / 123	None	ABC03173 ABC03175
MLOC_60357.1	666	5e-52	332 - 494	90	146 / 163	None	ABC03173 ABC03175 ABC03314 ABC03315 ABC37048 ABC37597