barSeed - Barley Seed Development Database

Probe ABC03130

Source Contig ABC03130

barSeed

Links

Affymetrix Source Sequence (688 bp)

>ABC03130 688
CCAGAGAGACTACCACTATGTACAGGACCCTGGGGGAGAACTACAATGAGAGAGTGTTGC
CTTCAATCATTCATGAAACACTCAAAGCTGTGGTTGCACAATACAATGCCAGTCAGCTAA
TCACACAGAGAGAGGCTGTGAGCAGGGAGATCAGGAAGATTCTGACAGAGAGGGCAAAGA
ACTTCAACATCGCTCTGGATGATGTGTCCATTACCAGTCTCAGCTTTGGTAAAGAGTTCA
CTCATGCCATTGAAGCCAAACAGGTTGCTGCCCAGGAAGCTGAGCGCGCCAAGTTCATTG
TTGAGAAGGCTGAGCAAGACAAGAAAAGTGCAATTATCAGGGCACAGGGAGAGGCAAAGA
GTGCCGAGCTGATTGGTAATGCCATCGCCAACAACCCTGCTTTCGTCGCACTCAGGCAGA
TTGAAGCCGCCAGGGAGATCGCCCACACCATCGCAGTCTCCAACAACAAGGTGTTCCTGG
ACTCAGGCGACCTGCTGCTTGGGCTCCAGTCGCTCAAGATGTTGAACAACAACAACAAGA
AATGAGACCGTTTCCTGTCACGCACGTTGCGGTTACCATCGACCCGTCTCCATTGAAGAA
AGTACTTTTGAGAGGAATGAACGCTTAGTTTCTGGCATTCCCAACCCGAAAACAAGACGC
CCTTGCTACTGTAACCTGTTTGTGCACT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369519	1238	0.0	388 - 1076	99	686 / 689	CUST_8916_PI390587928	ABC03129 ABC03130 ABC40547
MLOC_57006.1	1366	0.0	117 - 809	98	681 / 693	CUST_8916_PI390587928	ABC03129 ABC03130 ABC40547
MLOC_77340.4	598	2e-75	213 - 460	87	221 / 253	None	ABC03129 ABC03130
MLOC_77340.1	1172	2e-75	505 - 752	87	221 / 253	None	ABC03129 ABC03130
MLOC_77340.2	1198	2e-75	531 - 778	87	221 / 253	None	ABC03129 ABC03130
MLOC_77340.3	1598	2e-75	942 - 1189	87	221 / 253	None	ABC03129 ABC03130