barSeed - Barley Seed Development Database

Probe ABC03026

Source Contig ABC03026

barSeed

Links

Affymetrix Source Sequence (1360 bp)

>ABC03026 1360
ACGCCGTCTTCGTCGTCGTCTCGTCCGACCGCGACACGTAGTCACGTCGTACGCTGTTGA
AACTTGATAGGATAGCTAGTGAGCCATGGCGACGATGAGAGCCGCGCTGCTTGGCACCGT
GGTGCTGCTGTGCGCGCTCCGTCACGGCGGAGCGCAGCGGTACGAGGCCATCTACAGCTT
CGGCGACTCCATCTCCGACACCGGCAACCTCTGCGTCGGCGGCTGCCCGTCGTGGCTCAC
CACGGGGCAGTCGCCCTATGGCGAGACCTTCTTCAAACGCCCCACCGGCCGCTGTTCCGA
CGGCCGCGTCATCGTCGACTTCCTCGCTGAGCACTTTGGGCTGCCGCTGCTGCCGGCGTC
CAAGGCCGGCGGCGACTTCAAGAAGGGCGCCAACATGGCGATCATCGGCGCCACCACCAT
GGACTTCAGCTTCTTCCAGTCCATCGGCCTCAGCGACAAGATCTGGAACAACGGCCCCCT
GGACACCCAGATCCAGTGGTTCCGGAAGCTCCTCCCGTCCGCCTGCGGCAAGGATTGCAA
GCGGCATCTTTCCAAGTCCCTCTTCGTGGTGGGCGAGTTCGGCGGCAACGACTACAACGC
CGCGCTCTTCTCCGGCCGGACCATGGCCGACGTCAGGGGCTACGTGCCGCGGGTCGTCAG
CCATATCATCCGTGGCCTCGAGACGATGATCAGAGTGGGCGCGATGGACATCGTGGTGCC
GGGGGTGCTCCCCATCGGGTGCTTCCCCATCTACCTCACCCTCTACGGGACCTCCAACGC
CGGCGACTACGACGGCGACGGCTGCCTCAAGAGCTACAACGAGCTCTCCGCCCACCACAA
CTCGCTGCTCCGGCGGAGCCTCGCCAACCTCCAGAGGACATACCCCCACACCAGGATCAT
GTACGCCGACTTCTACGCGCAGGTCATCCAGATGATCCGGGCCCCTCAGAATTTCGGCCT
CAAGTATGGGCTGAAGGTGTGCTGCGGAGCCGGCGGGCAGGGCAAGTACAACTACAACAA
CAAGGCAAGGTGCGGCATGGCCGGGGCGAGCGCCTGCTCTGACCCGCACAACTACCTCAT
CTGGGACGGCATCCATCTCACCGAGGCGGCGTACCGCTCCATCGCCAATGGCTGGCTCAA
GGGCCCTTACTGCAGCCCCCGCATCTTGCACTGATCATCCGTAGGCTCTAATGTTGATTT
ACGTATTATTGTTTTATTTATTGACTTGATGCGTTTTGTGAGTGTGCGTGGTGGGATCGA
TCGATGCGTCATGTCTATGTGTGGATGTAACAACTAATATGATGAATTTTATGGGGGTAA
TTAATCAGGTTGCCTCCACAGAATAAATAAAACTGTAGAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_57544.1	1481	0.0	113 - 1472	99	1356 / 1360	CUST_41504_PI390587928	ABC03026 ABC40375
MLOC_57544.2	1343	0.0	1 - 955	99	953 / 955	None	ABC03026
MLOC_57544.3	675	0.0	1 - 673	99	671 / 673	None	ABC03026
MLOC_61496.1	1279	2e-152	134 - 1142	77	781 / 1018	CUST_5802_PI390587928 CUST_27637_PI390587928	ABC03024 ABC03026 ABC45116