barSeed - Barley Seed Development Database

Probe ABC02893

Source Contig ABC02893

barSeed

Links

Affymetrix Source Sequence (1489 bp)

>ABC02893 1489
CATCATCCGCTGCCCTCTCTTCCCCTCCACTCCTCCTCGCCGCCGCCTCCGGCTAAGGCA
ATGGCGATGGCCTCCGCGCACGCGCCGAGCGGCGCCGGGAGCCTGGCGATTCGGCCGCGC
GGGCCGGCCGGGCTGGGCTACCTCGGCCTAGGCCCCTCCAGGCCGGCCCTCCGCCCCGTC
GCCCTCGCGAGGCGCGCCGCGCCGTCCCCGCTGCTGCGGTGCGCCGCGGCGGCCTCCTCG
CCCCCGGCCGCGGGCGGGGCGCGGCCCGCGTCGGCGCCGCGCTTCATCCAGCACAAGAAG
GAGGCCTTCTGGTTCTACCGCTTCCTCTCCATCGTCTACGACCACGTCATCAACCCGGGC
CACTGGACCGAGGACATGCGCGACGACGCGCTCGAGCCCGCCGACCTCTACAGCCCCAAG
CTCAAGGTCGTCGACGTCGGCGGCGGCACGGGATTCACCACGCTCGGCATCGTCAGGCAC
GTCGACCCCGCCAACGTCACCCTGCTCGACCAGTCCCCCCACCAGCTCGACAAGGCCAGG
CAGAAGGAGGCCCTCAAGGGGGTCCACATCATGGAGGGCGACGCCGAGGACCTCCCCTTC
CCCACCGACACCTTCGACCGATACGTCTCCGCCGGCAGCATCGAGTACTGGCCTGACCCG
CAGCGAGGAATCAAGGAGGCCTACAGGGTCCTGAGGCTCGGCGGGAAAGCTTGCTTGATC
GGCCCTGTGCACCCAACATTTTGGCTGTCTCGCTTTTTCGCCGATATGTGGATGCTGTTC
CCCACTGAAGAGGAGTATATCGATTGGTTCACAAAGGCAGGGTTCAAGGATGTTCAGCTC
AAGAGGATTGGACCAAAGTGGTACCGTGGTGTCCGTAGGCATGGCCTCATCATGGGGTGC
TCCGTGACTGGTGTCAAGAAAGAAAGTGGGGACTCCCCTTTACAGCTTGGTCCGAAGGCT
GAAGATGTTAGCAAGCCTGTGAATCCTATCACTTTTTTCTTCCGCTTCCTCATGGGAACG
ATATGTGCTGCGTACTATGTTCTGGTGCCTATTTACATGTGGATAAAGGACCAGATTGTG
CCCAAAGGCATGCCGATCTAAGGGAGGAGAATTGAGCTGCAACGAAGAGAGGATAGCCAA
TATCTGAATTAGGCTTCTCTATATTAGGCACTTCACATCTGTTTTTGTTCACCTTTTATA
TTTCCTGTCGTCGTGTATTTATTTTACTTTGGGTCTTGTTATGTGGAGAAATAATATTGG
AGACTTGGATTAAACGCGTCAGAGCTCTTTGGTGTGAAATGGCTCATTTGTAGCAGGTCA
TTGTTTCGGAAATAGAATGTATCTGTAATATTTCTGCACTCTATGCTGACTTGCTAAGTG
GTAGGAAAAATGATACATGAGCTGCATTCCTGTTTGGTTGCAGCATCTAGCCACCTACTA
TGGCGTTGTATACCTGATTTCTCTGGTACTCAGGTGTATAGGGACGCGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK357314	1287	0.0	3 - 1287	100	1285 / 1285	CUST_10483_PI390587928	ABC02893 ABC02895 ABC49716
MLOC_36760.1	942	0.0	1 - 942	100	942 / 942	None	ABC02893 ABC02895
MLOC_36760.3	683	0.0	6 - 683	100	678 / 678	None	ABC02893 ABC02895
MLOC_36760.2	3220	7e-162	496 - 805	100	310 / 310	CUST_10483_PI390587928 CUST_5178_PI390587928	ABC02893 ABC02895 ABC49716
MLOC_14712.1	1181	0.0	113 - 953	87	736 / 842	CUST_3448_PI390587928	ABC02893 ABC41141
MLOC_6795.2	1409	0.0	272 - 1090	81	669 / 822	None	ABC02893 ABC02894
MLOC_6795.1	1324	0.0	290 - 1108	81	669 / 822	None	ABC02893 ABC02894
AK251322.1	1232	0.0	63 - 881	81	667 / 821	CUST_5241_PI390587928 CUST_9591_PI390587928	ABC02893 ABC02894
MLOC_5315.3	1870	2e-171	835 - 1641	80	648 / 808	CUST_14529_PI390587928	ABC02893 ABC02895 ABC10536
MLOC_5315.1	3070	2e-171	1959 - 2765	80	648 / 808	CUST_14529_PI390587928	ABC02893 ABC02895 ABC10536
MLOC_5315.2	2152	2e-171	1041 - 1847	80	648 / 808	CUST_14529_PI390587928	ABC02893 ABC02895 ABC10536
MLOC_5315.4	1762	2e-52	293 - 642	77	271 / 350	None	ABC02893 ABC02895