- Probe ABC02857
- Source Contig ABC02857
Affymetrix Source Sequence (1777 bp)
>ABC02857 1777 CACGCACGCACGCACGCGTACTCCTCCCTCCACCCCGACCGACACGCACCTCACCGCACC GGCGAGCTAGGGTTCGCTCGCTCGCTCGGGCGTCCGTCCATCCATCCATCTCCGGCGGGC GGGCGGGGCGGGCATGGCGGGGATACGGTGGCCGCCGGAGGACCCGGAGATGTTCCCGAC GCGGATGCTGGGGACGGGGGTCTGGGGCGGGCCCCCCGCCGCGCCCGGCGAGGCGGCGTC GGACGACGACCGCTCCGTGGCGGCCGACTCCTGGTCCATCAAGAGCGACTACGGGAGCAC GCTCGACGACGAGCAGCGCTACGCCGACACCGCCGAGGTGCTCCTCGCCTCCTCCTCCTC CTCGGCCGCCTCCGCCGCCGCGCCCTCCGCCTGCTCCTCCTCCCTCAGCGCCCACCACTC CTCCGACTTCAGCTTCGACAAGGACGTGCCCGACGTCGTGCCGCCGATGCTGGGCCTGCA CAATTACCAGGACGGCGCGTTCGCCGAAGACCTAGCCAATTACCACGAACGCAGCCACGC CGATGACTGGTTTGGCACCGAGGCCATGGATGTCCTTGTAGGCTGGACGAAAAACTTATG TTCCAGCAAGGATTTGTCCGGCTGCAGCGTACTTGACATAGGAACCGGGAGCGGACGACT CTTACAGCAGCTTGCAAAACAAGGGTTTTCTGATCTAACTGGCATTGACTATAGTGAAGC CGCAATTGAGCTTGCTCGAAACCTTGCAATTCGTGATGGATTTGAGCACATTAATTTCTT GGTTGATGATGTTCTGGAGTCGAAGTTGGAGAGGAGATTTGAACTTGTGATGGATGAAGG AACTCTGGATGCAATAGGGCTCCACCCTGATGGACCTGTAAAGAGAATGATGTATTGGCA GTCAGTGGCTAGCTTGGTTTCTCCTGGTGGCATACTGGTGATCACATCCTGCAGCAGGAC CAAGGATGAGCTAGTGCAGGAGGTGGAGAACTTCAATCAGAGAAAGTTGGGCGCCACGCT ATCTGAAGGAGCGCTGACCAGTGATGCTGTGGTGTTCAAGTACCTCGACCATGTGCAAGC TTACCCAAACGTCGATGGTGTTTGCATCGCCACCGTTGCTTTCCTGCATACATGAAATAT ATGTATATGTATCCATCCTCCCTCTCTTGTTCCTAACTTATCAGACCTGTGAGTAACAAT GTACCCCAGGACAGCTGTTCTTCCATGGATGATAATTTACCTTGTTGGATACGTTATTCG CTAGAAAAAAACAATAACCAATAGTCTTTGCTGATCCGCTGTTTTCTCTAGCTCCCACGA GTCTTTAGCTGCACCGACCGATCTCGATCATGGAGGATGAGAGGAGCACCCAGTCATACC AGGGAGCTGAGGCCGATCAGGTGGAGGTGACGGACAGGGGCCTACTCGGCAACCTCCTCG GCAAGAAGAAGGAGGAGGAGGACAAGAAGAAGGAGGAAGAGCTGGTCACCGGCATGGAGA AGGTCTCCGTGGAAGAGCCCGAGGTTAAGGAGGATGGCGAGAAGAAGGAGACTCTCTTCT CCAAGCTGCACCGATCCAGCTCCAGCTCCAGCTCGGTGAGTGTAAACATGATTTACTAGC GCTTTGCTGTATTAAGATTAAGATATCACATGGTTGTTGCGGTTAATTACTGACCTCGTG TGTGATCGTCTGTACAGTCTAGTGACGAGGAGGAGGAGGAGGAGGTCATCGATGAGAACG GTGAGGTGATCAAGAGGAAGAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK373517 | 1238 | 0.0 | 2 - 1236 | 99 | 1231 / 1236 | None | ABC02857 ABC02858 |
| AK370438 | 1348 | 0.0 | 2 - 1229 | 99 | 1221 / 1228 | CUST_7883_PI390587928 | ABC02857 ABC02858 |
| MLOC_56997.1 | 2778 | 0.0 | 1486 - 2201 | 99 | 712 / 716 | CUST_7883_PI390587928 | ABC02857 ABC02858 |
| MLOC_56997.2 | 530 | 0.0 | 1 - 530 | 99 | 526 / 530 | None | ABC02857 ABC02858 |
| MLOC_56997.3 | 746 | 0.0 | 1 - 520 | 99 | 517 / 520 | None | ABC02857 ABC02858 |
| MLOC_56997.4 | 492 | 0.0 | 1 - 492 | 99 | 486 / 492 | None | ABC02857 ABC02858 |
| MLOC_56995.6 | 2358 | 2e-168 | 1898 - 2225 | 99 | 326 / 328 | CUST_7883_PI390587928 CUST_29819_PI390587928 | ABC02857 ABC02858 |
| AK252668.1 | 1146 | 6e-168 | 23 - 346 | 99 | 323 / 324 | None | ABC02855 ABC02856 ABC02857 |
| MLOC_14884.1 | 1231 | 8e-162 | 758 - 1078 | 99 | 320 / 324 | None | ABC02855 ABC02856 ABC02857 |
| MLOC_28740.1 | 499 | 1e-160 | 188 - 498 | 99 | 310 / 311 | None | ABC02857 |
| AK359536 | 1540 | 3e-146 | 586 - 885 | 98 | 294 / 300 | None | ABC02857 ABC02858 |
| MLOC_74665.1 | 1037 | 4e-145 | 408 - 708 | 98 | 294 / 301 | None | ABC02857 ABC02858 |
| MLOC_74665.2 | 1287 | 4e-145 | 383 - 683 | 98 | 294 / 301 | None | ABC02857 ABC02858 |
| MLOC_74665.3 | 1660 | 1e-144 | 627 - 926 | 98 | 293 / 300 | None | ABC02857 ABC02858 |
| MLOC_74665.4 | 1555 | 1e-144 | 627 - 926 | 98 | 293 / 300 | None | ABC02857 ABC02858 |
| MLOC_74665.5 | 1244 | 4e-140 | 586 - 888 | 97 | 293 / 303 | None | ABC02857 ABC02858 |