barSeed - Barley Seed Development Database

Probe ABC02799

Source Contig ABC02799

barSeed

Links

Affymetrix Source Sequence (1724 bp)

>ABC02799 1724
GGAAGCCCAACGCTTACCCCTCAAGCCGGATCCGCCATGGCGCTGTACCGCCGCGCGGCC
TCCGCGATCCGGCGGCGCGGGGCCGCGCCTCTCCCCATGCTCCCGGCGCGGGCCATGGCG
TCGCTCTTCGGCCACGTCGAGCCGGCGCCCAAGGACCCCATCCTCGGCGTCACCGAGGCC
TTCCTCGCCGACCCCTCCCCCGACAAAGTCAACGTCGGCGTCGGCGCCTACCGGGACGAC
GACGGCAGGCCCGTCGTGCTCGACTGCGTGCGCGAGGCGGAGCGCCGGATCGCCGGCAAC
CTCAACATGGAGTACCTTCCCATGGGAGGGAGTATCCACATGATTGAAGAGTCGCTAAAG
CTGGCGTATGGTGAGGACTCCGAGTTCATCAAAGATAAAAGAATTGCAGCGGTGCAGGCA
CTTTCAGGAACTGGCGCATGCCGGCTCTTCGCTGATTTCCAGAAGCGTTTCCTGCCGGAT
TCGCAGATCTACATACCTACACCAACGTGGTCCAACCATCATAATATTTGGAGGGATGCT
CAAGTGCCGCAGAGGACATTCTCATATTACCACCCGGAATCGAGAGGGCTTGACTTTGCA
GGATTGATGGATGATATCAAGAATGCTCCAAATGGTTCTTTCTTTTTGCTTCATGCATGT
GCCCATAATCCTACTGGAGTAGATCCCACTGAGGAACAATGGCGAGAAATATCCTATCAG
TTCAAGTTGAAGAACCATTTCCCATTCTTTGACATGGCATACCAAGGATTTGCTAGCGGT
GATCCAGAGAGGGATGCCAAGGCAATCCGTATATTCCTTGAAGATGGACACCAAATTGGA
TGTGCTCAGTCATATGCAAAGAACATGGGTCTTTATGGACAGAGAGCGGGATGCCTGAGT
ATTCTCTGCGAGGATGAGATGCAAGCAGTTGCTGTTAAGAGCCAATTGCAACAGATTGCG
AGACCAATGTACAGCAACCCACCTGTTCATGGTGCGCTGGTTGTTTCTATTATCCTTAAT
GATCCAGAATTGAAGAACTTATGGTTGGGAGAGGTCAAGGGTATGGCTGATCGTATCATT
GGAATGCGGAAGGCACTTCGGGAGAATCTTGAAAAGTTAGGTTCACCTTTATCATGGGAG
CATGTCACCAATCAGATTGGAATGTTTTGCTACAGTGGGATGACGCCTGAACAAGTCGAC
CGCTTGACAAGTGAATACCATATCTACATGACACGCAACGGGAGAATAAGCATGGCCGGC
GTAACGACGGGCAACGTCTCCTACTTGGCTAATGCCATTCATGATGTTACCAAGTGAAAT
CGAGGACCATCTTCAGCGAATGGAGCGAAAGGGGTTTTCCCTTTGTTACTGGGGCTATTC
ATTCTATACTGTCATGCTAGAGAAATAAGTTCTAGGAAGTAAACCTGTTGCGGCTGTCCA
ACAACGGAAAATTCTACCTGTATGTATGGAGAAGCAGAGACGTCCCGACTTATTTTTGCC
AGATTATCTTATTGTGATTCTAGTCACATTCGAATGAAACGCCAGTGGAAAATGCTTGGT
TATACCTTGATTTTAACAAGATGCTGGAGGACTTCAAACTCGACGAAATCAAACATTTGG
ATGCTCTCTTGCAGTACTAGCTCCAAGCATATGCTTTTTTCTTCACCATTCGAGATGTTT
GGATTGGGTCTAAGCAGAATAATGGCTCCACTTCTTCCCAGTGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK364730	1823	0.0	92 - 1816	99	1722 / 1725	CUST_22721_PI390587928	ABC02799 ABC02803
MLOC_80438.1	1524	0.0	1 - 1524	99	1519 / 1524	CUST_22721_PI390587928	ABC02799 ABC02803
AK363270	1581	0.0	193 - 1403	84	1021 / 1211	CUST_19899_PI390587928	ABC02799 ABC02803
MLOC_28314.1	680	4e-85	10 - 233	92	212 / 230	None	ABC02799
MLOC_81790.3	1765	4e-70	1235 - 1413	94	168 / 179	None	ABC02799 ABC42898
MLOC_81790.1	1599	4e-70	1167 - 1345	94	168 / 179	None	ABC02799 ABC42898
MLOC_81790.2	1669	4e-70	1138 - 1316	94	168 / 179	None	ABC02799 ABC42898