barSeed - Barley Seed Development Database

Probe ABC02465

Source Contig ABC02465

barSeed

Links

Affymetrix Source Sequence (2070 bp)

>ABC02465 2070
GGGCTGCAGGAATTCGGTACGAGGGTCGCCCACACGATCCACCAGCACCACCTCCACCTC
CACCTCCACCTCCCTCTCCTCGCCGTCTCCCACCGACCCCAACCCGAGGTTGCGCTTCGT
TGGGTTCAGCATGGGTCTGGTGAAGGAGGGCGCCGACATGGAGGAGGGAACCCTGGAGAT
CGGCATGGAGTACAGGACAGTTTCTGGTGTGGCAGGACCTCTGGTTATCTTGGACAAAGT
AAAGGGCCCAAAATACCAGGAGATTGTAAACATCCGATTGGGAGATGGCACCACTCGGCG
TGGTCAAGTTCTGGAAGTTGATGGTGAAAAGGCTGTTGTGCAGGTCTTCGAAGGCACTTC
AGGAATAGACAACAAATACACAACTGTTCAGTTCACAGGCGAGGTCCTGAAAACTCCTGT
ATCGCTTGATATGCTTGGACGTATTTTTAACGGCTCTGGAAAGCCTATTGATAATGGCCC
TCCGATATTGCCTGAGGCCTACTTGGATATCTCCGGAAGTTCTATTAACCCAAGTGAGAG
AACCTACCCAGAGGAGATGATTCAAACAGGGATATCTACAATTGATGTCATGAACTCCAT
TGCTCGAGGGCAAAAGATTCCTCTCTTTTCTGCTGCTGGTCTTCCTCATAATGAAATTGC
TGCTCAGATTTGTCGTCAGGCTGGTCTTGTCAAGAGGCTGGAGAAAGGAAAGCACGCAGA
GGGTGGTGGTGAAGATGACAATTTTGCTATTGTGTTTGCTGCTATGGGAGTGAACATGGA
GACAGCCCAATTCTTCAAACGTGATTTTGAAGAGAATGGTTCAATGGAGAGGGTCACCCT
TTTCCTGAACTTGGCAAATGATCCCACGATCGAACGTATTATCACCCCTCGTATTGCGCT
AACAACAGCAGAATATTTGGCATATGAATGTGGGAAGCACGTTCTTGTCATCTTGACAGA
TATGAGTTCATATGCAGATGCACTTCGTGAGGTATCAGCAGCCCGAGAAGAGGTGCCAGG
TAGGCGTGGTTATCCTGGATATATGTATACTGATCTGGCAACCATTTATGAGCGTGCCGG
GCGTATTGAAGGAAGAACGGGCTCCATTACCCAAATACCCATTCTGACTATGCCTAATGA
TGACATCACACATCCAACTCCTGATCTCACGGGGTACATTACTGAAGGACAAATATACAT
TGACAGACAGCTCCATAACAGACAGATATACCCACCCATCAACGTCCTTCCATCTCTCTC
TCGATTGATGAAGAGTGCTATTGGTGAGGGTATGACCCGTCGAGACCATTCAGATGTGTC
TAATCAGCTTTATGCCAACTATGCTATTGGAAAGGATGTCCAGGCCATGAAAGCAGTTGT
GGGAGAGGAGGCTCTCTCTTCTGAAGATCTGCTTTATCTAGAATTCCTGGACAAATTTGA
GAGGAAATTCGTAGCACAGGGAGCATACGATACTCGGAACATCTTCCAGTCACTTGACCT
AGCATGGACATTGCTTCGCATCTTCCCTCGCGAGCTGCTCCACCGTATCCCCGCGAAGAC
TTTGGATGCGTTCTACAGCAGAGATGCTGCCCACTGATCGATCTCATCTTTGTTGGGAGA
TCCAATGTTTTCTCAAGTGCAGCTTGAATAAATTGAGCAGTTCAAACTTCTGGCCTTTTT
GCTGTAGTTATTATTATAGTCAGATCCCATTCTTTTCGAGTCAGCGAGCATAAGTTATTT
GTAGATTTCTTGGTCATGGCGTCTTTTGTAATATTGTCTCGTGTAATATCACCTCCTGTA
TTGTTGAACCAAAGCACTTGAGCTCTTTTTTGGTTCCACTTCCCAGAACTGTTAGCAAGA
GCATCCTAGGCCAAGATGCTCGAACACGCTGGTTGTATCTACTTTTGTGTATGAATAAAG
ATGGGGCAATAAACCGTGCTGGACTGCACGTGCTGGTGTACATTGTTAACTACTGTAGTA
TTCGGGTTCTGTAGCCTGTGTAATTATTTTCTCTTGGTACTTCTTTACTTTGATGAAACT
TGAAGCGCACATTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK365478	1954	0.0	11 - 1952	99	1939 / 1948	None	ABC02464 ABC02465 ABC06873 ABC38423
MLOC_61085.1	2052	0.0	1 - 1854	99	1847 / 1854	None	ABC02464 ABC02465 ABC06873 ABC38423
AK353955	1910	0.0	115 - 1587	88	1290 / 1474	CUST_26446_PI390587928 CUST_26445_PI390587928	ABC02464 ABC02465 ABC49712
AK251793.1	1965	6e-69	1008 - 1150	100	143 / 143	None	ABC02464 ABC02465
MLOC_14779.1	1189	0.0	198 - 1187	88	874 / 991	CUST_26446_PI390587928	ABC02464 ABC02465
MLOC_14779.3	1084	0.0	150 - 1082	89	827 / 934	CUST_26446_PI390587928	ABC02464 ABC02465
MLOC_14779.2	1432	0.0	500 - 1432	89	827 / 934	CUST_26446_PI390587928 CUST_41257_PI390587928	ABC02464 ABC02465
MLOC_67422.1	2018	0.0	279 - 1720	80	1162 / 1447	None	ABC02465 ABC06873
MLOC_69388.1	806	3e-142	122 - 576	87	395 / 455	None	ABC02464 ABC02465 ABC49712