barSeed - Barley Seed Development Database

Probe ABC02462

Source Contig ABC02462

barSeed

Links

Affymetrix Source Sequence (822 bp)

>ABC02462 822
GATCCACCACTCGCGCCTCTCTCGCCCTTCCCGCCGCCGCCGCCGCCGCCGCTCCCCTCG
CCGCAGCAGCAGCCGCAGCCATGGGGCGCATGCACAGTCGCGGGAAGGGCATCTCGTCGT
CGGCGCTGCCGTACAAGAGGACTCCACCGAGCTGGGTCAAGACCGCCGTCGCCGATGTGG
ACGAGTTAATCACCAAGGCCGCGAAGAAGGGCCAGATGCCGTCGCAGATCGGCGTCCTGC
TCCGTGACCAGCACGGCATCCCCCTCGTCAAGAGCGTCACCGGGAGCAAGATCCTTCGCA
TCCTCAAGGCCCATGGGCTGGCACCAGAGATCCCGGAGGACCTCTACTTTCTGATCAAGA
AGGCGGTGGCGATAAGGAAGCACCTGGAGAGGAACAGGAAGGACAAGGACTCTAAGTTCA
GACTCATCCTTGTGGAGAGCAGGATCCACCGCCTCGCTCGCTACTACAAGCGCACCAAGA
AGCTCCCACCCACCTGGAAGTACGAGTCTACCACCGCCAGCACTCTGGTGGCCTAAGGGA
GATATGCATCTGGTGTGCTCTTAGCTGATTAAAGCTTGATTGTTCCAGAAACCATTCTTA
TGTAACGCTTTATGAGAGTTTGGAGCCAAGTCGATGCTGCAAATTTTCTATGTTTGACTG
GAGGATGCTGTAAAACCTTTGTTGTTTCACTGTTCTGTCTGTTAAACGACTGTTATAATG
TACCCAGATTTTGTCAGTTACAGTTAGCAGTTACCTTATGTGTTTTCAGATAAAAAAAAA
AAAAAGCTCATGTTGCTCTTTGGCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355603	906	0.0	21 - 788	99	767 / 768	CUST_18762_PI390587928 CUST_23844_PI390587928	ABC02461 ABC02462 ABC28922
MLOC_76906.1	566	0.0	1 - 566	99	565 / 566	None	ABC02462 ABC28922
MLOC_56499.1	958	6e-175	46 - 595	87	481 / 553	None	ABC02461 ABC02462 ABC40542
AK363524	820	8e-174	93 - 727	84	540 / 640	CUST_18761_PI390587928	ABC02461 ABC02462 ABC40542