barSeed - Barley Seed Development Database

Probe ABC02434

Source Contig ABC02434

barSeed

Links

Affymetrix Source Sequence (914 bp)

>ABC02434 914
GTACTCCCGCCTCACCCCCCTCCTCCCCAGGTAAAGTTCTGAGCAACCAGAGTTTTGCCA
TGACCCACGACTTGGTCTTCCACTGCAGTTCCACTTACTCTCACTGCCTCCATATGGTTG
TTGCCGTGCGTAATTCACAGTTTCATGTTAGCTCTGGTGGTTATCCTATAAAAAGTCAGA
GTTCCGTCTTAGTTTTATTTTGCGTATGCGACGGACACATACTTGTGTGGTGTGTGTACT
GGTCAGGGATTCAGGGTACCAAAACCATTCTGTAACTCGGTTTCCTATTTTGTACTGAGC
TGCGAGGGCTACGTCGGGCACTACATGATCGGCAGCCACTTCCGCCGCGACTCCAAGGTC
GTCATCGACCAGGCCCTCGCCTACGTCGACTCCCTCAAGCTCTCCGGCAACGGCAAGGAG
GTCTGGGTCTTCGACATCAACGAGACCACCCTCTCCAACCTCCCCTACTACGCCAAGCAC
GGCTTCGGGAGTGGTCAGGGTTAGCTCGCTTATTCTGGTCAAGTGAGGAAGCAGGAGTAG
CAAATTATGGAGGCAACAACGGACGTACCATGATGGTTGATTTGTACTATGATATTACTA
GCTTGGCTTGTGAATAATGCAGAAGATGTGTATGACCTGCTTCAGCTGCTGCAATCAATG
TATCATCATCTTTTTTATGCTTAGACGCACTCGGGTCTCGAGAAGACCAAAATCTGACAA
GGGAAGTTCAGAGGCAGGCACCGTGCAAGATGAGCCTGAAACATTTCTCGTATCTTTGCT
CCATGGTGTGTGTTAGTTGTGGTTAATTTGATCTGTATTTAAGCTATCTACCTGATGTCA
TAAACTGCATGTACTACTGAACCTGCTACTGCTTACATTGCTTTATGATTTCATACTAAA
AAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK363050	3782	0.0	2890 - 3782	99	892 / 893	CUST_37434_PI390587928 CUST_27284_PI390587928	ABC02427 ABC02434 ABC06657 ABC06732 ABC08493 ABC30622
MLOC_2256.3	526	0.0	18 - 507	99	489 / 490	None	ABC02427 ABC02434
MLOC_2256.4	510	0.0	3 - 492	99	489 / 490	None	ABC02427 ABC02434
MLOC_2256.2	582	0.0	19 - 507	99	488 / 489	None	ABC02427 ABC02434
MLOC_26589.1	310	3e-143	35 - 310	100	276 / 276	None	ABC02434
MLOC_40588.1	1680	9e-94	1 - 229	94	221 / 236	None	ABC02434
MLOC_2256.1	306	4e-92	48 - 231	100	184 / 184	None	ABC02427 ABC02434
AK251203.1	1188	4e-87	291 - 483	97	187 / 193	CUST_4998_PI390587928	ABC02427 ABC02430 ABC02433 ABC02434 ABC02436
AK373175	927	4e-87	1 - 265	89	246 / 276	None	ABC02434
AK358112	1033	2e-76	292 - 483	94	180 / 192	CUST_4999_PI390587928	ABC02427 ABC02430 ABC02433 ABC02434 ABC02436