barSeed - Barley Seed Development Database

Probe ABC02057

Source Contig ABC02057

barSeed

Links

Affymetrix Source Sequence (593 bp)

>ABC02057 593
GCATCTTCTTGCCTCACACACTTCACTGTTACTAAGGAGTCAGGAGTAGTTCACTTCCTT
CCGGTCTCCTGCCACCAAGCTTTGCTCCGGCGAAGATGCTACGGTGACCGGCGCCTACCT
CGACCAGAGGCTCGCCGCAGCAAAGCGCTGCTCCAGAGAGGCTGCCATGGCCGGAGCCAA
GGCCGCGGCCGTCGCCACCGTCGCCGCCGCAGTGCCCACCCTGGCGAGTGTGAGGATGCT
TCCGTGGGCCAAGGCGCACCTGAACCCCGCCGGTCAGGCGCTCATCATCTCCACCGTCGC
CGGGATGGCCTACTTCATCGTCGCCGACAAGACCATCCTCTCCATGGCCAGGAAGCATTC
CTTCCAGGACGCGCCGGAGCACCTCAAGAACACCTCATTCCACTAATTATTGGGCTGTAT
GTACGTTTTTGCTGAAAGATACTCACGTAGTACGAGTATAATGTTCAGCGAGGCGATGCA
GATCAGGCCTTGCGCCTCTATCCGTGCAGGCACTTGTCTGATGAAGTAATCATAATGTAT
TCAGCCAGTAATCTTGAATTAATAATGACTTGCATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_13323.1	200	5e-85	27 - 200	99	173 / 174	CUST_12529_PI390587928	ABC02057
MLOC_34309.1	157	6e-69	1 - 155	97	151 / 155	None	ABC02056 ABC02057
MLOC_71169.1	667	5e-60	2 - 178	91	161 / 177	None	ABC02056 ABC02057 ABC02066 ABC32965
MLOC_74696.1	386	2e-58	2 - 176	90	158 / 175	None	ABC02056 ABC02057 ABC32965