barSeed - Barley Seed Development Database

Probe ABC01922

Source Contig ABC01922

barSeed

Links

Affymetrix Source Sequence (1335 bp)

>ABC01922 1335
CCCCTCCCTTCCTCCCTGCTCGCGCCGCCGCTCCCACCCCTCCCGTCCCTCCTCTCCTTC
CCGGCGCCACCCAGACGCTCGAGTCCCCGACCAACCATGGCGGCAGCGGCCGGAGAAGCC
CCGCGGGCGCTGTCCCAGAAGGAGCAGGACGTACAGATGATGCTCGCCGCCGACGTCCAC
CTCGGCACCAAGAACTGCGACTTCCAGATGGAGCGCTACGCCTACAAGCGCCGCTCCGAC
GGCATCTACATCATCAACCTGGGCAAGACATGGGAGAAGCTCCAGCTCGCTGCGAGGGTC
ATCGTCGCCATCGAGAACCCGCAGGACATCATCGTCCAGTCCGCCCGCCCCTACGGCCAG
CGCGCCGTCCTCAAGTTCGCGCAGCACACCGGCGCCAACGCCATCGCCGGGAGGCACACC
CCTGGTACCTTCACCAACCAGATGCAGACCTCCTTCAGCGAGCCCCGCCTGCTCATCCTC
ACCGACCCAAGGACTGACCACCAGCCCATCAAGGAGTCTGCTCTGGGGAACATCCCTACC
ATTGCCTTCTGTGACACCGACTCTCCCATGCGATATGTCGATATTGGCATCCCAGCAAAC
AACAAGGGGAGGAACAGCATTGGCTGCCTCTACTGGCTCTTGGCCAGGATGGTTCTGCAG
ATGAGGGGCACCATCCTGCCTGGGCACAAGTGGGATGTCATGGTTGATCTGTTCTTCTAC
AGGGACCCTGAGGAAGCCAAGGAGCAGGAGGATGAAGCTGCTGGAGCCCCAGAGTATACT
GCAATCACTGATTATGCCGCAGCAGCTGGCCAATGGGGTGGTGACCAGTGGACCGCTGAT
GCACCTGCTCCCCCACCTGTTACTGGTGGCGAGTGGCCGATGGCCGAAGCTCCAGTTGCT
GGTGGTGATGGTGGATGGGATGCAGCAGGGGCACCTGTTGCTGTGGAAGGTGGCGTCGCT
CCTCCTGTTGCGGCTGCTACTGGCTGGGAGGCTGGCGTGCAACCCGCTGCTCAAGGCTGG
GAGTAGACTAGGATGGCACCTTGAGATGTCTTTGCGGCTCAAAGTTCATATTTTGTGAGG
CATGAATGAATATCTGATATCGATGCAGTCTGCTATATCTACCCTATGGACAAAAACTTG
TGTTTTAGGATTTTCTAGATGAACTTGTTATCTCTGTTATCGACATTGGGATGAGGGAGA
GGGAGACTGAAAGTTGTGTTATAAGTTGGCTTTCAACTTGCCTGTCTTAATTTTGTAGTG
CTTATACTTGATATTTCTATGAAAAAAAAAAAAACTGTCTATGTTTGTTTTTGGTTTCAA
AAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252834.1	1226	0.0	19 - 1226	99	1202 / 1209	None	ABC01919 ABC01922 ABC01923 ABC01924 ABC48539
MLOC_14041.1	859	0.0	1 - 859	100	859 / 859	None	ABC01919 ABC01922 ABC48539
MLOC_55662.1	1410	6e-172	530 - 1192	83	552 / 663	CUST_7866_PI390587928 CUST_10595_PI390587928	ABC01919 ABC01922 ABC43138
MLOC_47168.2	358	2e-157	2 - 358	95	339 / 357	None	ABC01922 ABC01924
MLOC_9621.1	364	2e-151	1 - 364	93	340 / 364	None	ABC01922 ABC01923 ABC01924
MLOC_26350.2	232	1e-118	1 - 232	100	232 / 232	None	ABC01919 ABC01922 ABC01924
MLOC_30312.1	278	4e-114	1 - 272	94	256 / 272	None	ABC01922 ABC01923 ABC01924
MLOC_26350.1	457	5e-93	1 - 186	100	186 / 186	None	ABC01922 ABC01924
MLOC_47168.1	204	5e-83	3 - 203	95	190 / 201	None	ABC01922
MLOC_47261.1	196	3e-80	1 - 196	94	185 / 196	None	ABC01922
MLOC_42304.1	195	2e-76	1 - 195	93	182 / 195	None	ABC01922