barSeed - Barley Seed Development Database

Probe ABC01873

Source Contig ABC01873

barSeed

Links

Affymetrix Source Sequence (1526 bp)

>ABC01873 1526
CGAAGGGCGCCGGCCGCCCTAGGTACCTGCAAAACCTAGCTCCATCCATCTGCCGCAGAG
AGTGTGAAAGATGGCGTCCAGAGCAGCAGCGGCCCTGGTCGTCGTGGCCATGGCCTGCGC
CGTCGTCCATTCGGCAGCGGTGGCCGCCGGGGGGCTCTCGCCGGACTTCCACGTGGGCTC
GTGCCCGGACCTGGAACACATCGTCCAGTATCACGTCGCCGAGGCCTTCCGCAAAGACGT
CGGCGTAGCGCCGGGGCTCATCCGCATCTTCTTCCACGACTGCTTCCCTCAGGGCTGCGA
CGCGTCGGTGCTCCTGACCGGCAACAACAGCGAGCAGGCGTTGGGGCCAAATCTGACGCT
CCGGCCGGTGGGGCTCAACCTCATCGAGACCATCCGCGCCGCCGTCCACAGGTCCTGCGG
CCGGACTGTCTCCTGCGCCGACATCACCGTTCTCGCTACCCGTGACTCCCTCGTGCTGGC
TGGCGGGCCCCGCTTTGAGGTGGCTCTGGGCCGGCGCGACGGGCTGGCCCCAGCGTCGCA
GGACCTCGTCTTCACCCTTCCAGCCCCCTCATTCACCGTGCCGGAGCTCCTCAAGTCCTT
CGGCGACCGCAACCTCGACAAGGCCGACCTGGTGTCCCTCTCCGGCGCACACACGTTCGG
CATCGCCCACTGCCCCGCCTTCTCCGACCGCTTCACGCCGGAAGTCGACACCAACCCAGC
AATCGACCCCAATTTCGCCGCCAAGCTCAAGGCCAAGTGCGCCAACGACGTGCCCGCGCT
TAGCGTCAACCAGTCGCTCGATGTGCGCACGCCGGACGTGTTCGACAACAAGTACTACTT
TGATCTCATCGCCAAGCAGGGCCTGTTCAAGTCGGACCAGGGCCTCATCGTCCACCCTGA
AACCACGCGCATGGCGACGCGATTCGCCCTCAACCAGGGAGCGTTCTTCGAGCAGTTTGC
CAAGTCCATGGTGAAGATGAGCAACATGGACTTGCTCACCGGCACCCAGGGCGAGATCCG
GTTCAACTGCGCCGTCCCCAACAGCCGTGTCGACGGCATCGAGACCGCCAGCGACGAGGG
CCATGCCTCCGCCATGTAAGAAATTGTTTAGTTGCCGTGATTGCTGAAGCGTGTGAGCGT
GTGTGTGTGTGTGCTATGATCATGTCATGGTACTAGTGGTTCTTTATAATTGTGATGTTG
TAATAAAATGAGTTGAGTGATCAGACATCAAAAAAAAAGTATATATATGCTTCCTACCCT
ATGAGGTTGTTCCCATTTGGGATAACACTCTGATCACCATACAACGTGAAATCTGTCTTG
GCTAGAAGTCCAGAGATGCTACCTCCCAGTAAGTTTTGTGCTGATTTATGCTGAAGCTTG
TGAGCGTGTGTGTGCTCTACGCCGTGTCATGGTGCTACTGTTTTTGTGTAATTTTGGTGT
TGTAATAAAATGAGTGAGTGATAAGACAATATGACGGCTGTGTGGAACAATCAGGCACCA
CCAGAGCATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_54892.1	1324	0.0	18 - 1322	98	1283 / 1305	CUST_34693_PI390587928	ABC01852 ABC01859 ABC01873
MLOC_72076.1	1390	0.0	208 - 1253	81	852 / 1054	CUST_39688_PI390587928	ABC01852 ABC01859 ABC01873
MLOC_65477.1	1546	0.0	242 - 1231	79	798 / 1005	CUST_17376_PI390587928 CUST_14517_PI390587928 CUST_14518_PI390587928	ABC01852 ABC01859 ABC01873
MLOC_72076.2	1404	1e-153	580 - 1216	82	529 / 643	CUST_34669_PI390587928 CUST_39688_PI390587928	ABC01852 ABC01859 ABC01873
MLOC_65477.2	1003	6e-113	211 - 684	82	393 / 477	CUST_14517_PI390587928 CUST_17376_PI390587928 CUST_14518_PI390587928	ABC01852 ABC01859 ABC01873