barSeed - Barley Seed Development Database

Probe ABC01364

Source Contig ABC01364

barSeed

Links

Affymetrix Source Sequence (633 bp)

>ABC01364 633
GCTCGCACCCGCCGCCTCCTCGGATCGTCCCTGCCGGAGAGACGCCGGAGAGCGCGAGCA
AACCCTAGCCTCCCACGATGGTGCTGCAGAACGACATCGACCTGCTCAACCCGCCGGCCG
AGCTCGAGAAGCTCAAGCACAAGAAGAAGCGCCTCGTCCAGTCCCCCAACTCTTTCTTCA
TGGACGTCAAGTGCCAGGGTTGCTTCAACATCACTACTGTGTTCAGCCACTCCCAGACTG
TCGTGGTGTGCCCAGGCTGCCAAACAGTGCTCTGCCAGCCAACCGGTGGCAAGGCCAGGC
TAACTGAGGGCTGCTCCTTCCGCCGCAAGGGCGACTAAACCTTTGAAGGCTACCTAAAAA
AGCAAGCCATTGTTGAACTTTGAGTTTCTCCAGGGCGTTAGTCTGAAGATTTTGCATTGT
CGGCAAGTTGAACCCATCTTTGGTAATGTGATATCTAGCTTGAGTAATATTATGATGACC
ACTGTACTATGTTCCGTTTGGGTTGTGAGATCAGACTAGTAGTACCAGCCTGGCATTATG
TTTGTCTTCGATGAACTGTTATTCCTTCTGATGTTGCTTTCTCTGCTATATGCTCTTGAA
TCTTTTATTGCTTTCATAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_17719.1	581	0.0	1 - 543	100	543 / 543	None	ABC01362 ABC01364 ABC01367 ABC01369 ABC01370
MLOC_37426.1	863	1e-116	483 - 856	87	339 / 389	CUST_21130_PI390587928 CUST_21133_PI390587928	ABC01362 ABC01364 ABC01367
MLOC_53060.1	616	1e-95	149 - 410	91	238 / 262	None	ABC01362 ABC01364 ABC01367 ABC01369 ABC01370
MLOC_37426.2	209	2e-64	43 - 206	94	155 / 165	None	ABC01362 ABC01364 ABC01367