barSeed - Barley Seed Development Database

Probe ABC01362

Source Contig ABC01362

barSeed

Links

Affymetrix Source Sequence (1192 bp)

>ABC01362 1192
GCAATAAAAGATTCAAGAGCATATAGCAGAGAAAGCAACATCAGAAGGAATAACAGTTCA
TCGAAGACAAACATAATGCCAGGCTGGTACTACTAGTCTGATCTCACAACCCAAACGGAA
CATAGTACAGTGGTCATCATAATATTACTCAAGCTAGATATCACATTACCAAAGATGGGT
TCAACTTGCCGACAATGCAAAATCTTCAGACTAACGCCCTGGAGAAACTCAAAGTTCAAC
AATGGCTTGCTTTTTTAGGTAGCCTTCAAAGGTTTAGTCGCCCTTGCGGCGGAAGGAGCA
GCCCTCAGTTAGCCTGGCCTTGCCACCGGTTGGCTGGCAGAGCACTGTTTGGCAGCCTGG
GCACACCACGACAGTCTGGGAGTGGCTGAACACAGTAGTGATGTTGAAGCAACCCTGGCA
CTTGACGTCCATGAAGAAAGAGTTGGGGGACTGGACGAGGCGCTTCTTCTTGTGCTTGAG
CTTCTCGAGCTCGGCCGGCGGGTTGAGCAGGTCGATGTCGTTCTGCAGCACCATCGTGGG
AGGCTAGGGTTTGCTCGCACCCGCCGCCTCCTCGGATCGTCCCTGCCGGAGAGACGCCGG
AGAGCGCGAGCAAACCCTACCCTCCCACGATGGTGCTGCAGAACGACATCGACCTGCTCA
ATCCGCCGGCCGAGCTCGAGAAGCTCAAGCACAAGAAGAAGCGCCTCGTCCAGTCCCCCA
ACTCTTTCTTCATGGACGTCAAGTGCCAGGGTTGCTTCAACATCACTACTGTGTTCAGCC
ACTCCCAGACTGTCGTGGTGTGCCCAGGCTGCCAAACAGTGCTCTGCCAGCCAACTGGTG
GCAAGGCCAGGCTAACTGAGGGCTGCTCCTTCCGCCGCAAGGGCGACTAAACCTCTGAAG
GCTACCTAAAAAAGCAAGCCATTGTTGAACTTTGAGTTTCTCCAGGGCGTTAGTCTGAAG
ATTTTGCATTGTCGGCAAGTTGAACCCATCTTTGGTAATGTGATATCTAGCTTGAGTAAT
ATTATGATGACCACTGTACTATGTTCCGTTTGGGTTGTGAGATCAGACTAGTAGTACCAG
CCTGGCATTATGTTTGTCTTGGATGAACTGTTATTCCTTCAAAAAAAAAAAAAAAAATTT
CTCTGCTATATGCTCTTGAATCTTTTATTGCTTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_17719.1	581	0.0	1 - 491	100	491 / 491	None	ABC01362 ABC01364 ABC01367 ABC01369 ABC01370
MLOC_37426.1	863	2e-116	483 - 856	87	339 / 389	CUST_21130_PI390587928 CUST_21133_PI390587928	ABC01362 ABC01364 ABC01367
MLOC_53060.1	616	6e-92	149 - 410	90	236 / 262	None	ABC01362 ABC01364 ABC01367 ABC01369 ABC01370
MLOC_37426.2	209	4e-64	43 - 206	94	155 / 165	None	ABC01362 ABC01364 ABC01367