- Probe ABC01247
- Source Contig ABC01247
Affymetrix Source Sequence (1439 bp)
>ABC01247 1439 GCGCAGTTTCTCATCGCCCCGTCCGAAACCTTTCTCCTTCTGTCCCGCAAACCCCCGAGA GATCACAGGATGTTCGGCTTCGGTCACCACGGCCACCATGGCCAGAACCCCCCCGCCCAC GCTCCGCCCGCCGCCGGCGGCAACCAGCCCACCTTCAAGATCTTCTGCAAGGCCGACGAG GGCTACTGCCTCTCCGTCCGCGACGGCAACGTCGTCCTCGCCCCCTCCAACCCCCGCGAC GAGCACCAGCACTGGTTCAAGGACATGCGCTTCAGCACCCAGATCAAGGACGAGGAGGGT AACCCCGCCTTCGCCATCGTCAACAAGGCCACTGGCCTCGCCGTCAAGCACTCCCTCGGC CAGTCCCACCCGGTGAAGCTGGTGCCATTCAACCCGGAGTTCCTCGACGAGTCCGTGATG TGGACGGAGAGCGGCGACGTCGGCAAGGGCTTCCGCTGCATTCGCATGGTGAACAACATC CGCCTCAACTTCGACGCCCTCAACGGCGACAAGGACCACGGCGGCGTGCACGACGGCACC ACCGTCGTCCTCTGGGAGTGGGCCAAGGGCGACAACCAGAGCTGGAAGATCCTCCCCTGG GGCGAAGAGGCCTACGCCGGAGGCAGCGCCAACGCACCACGCGGCGGCTCCTCAGAGCCC ACCGTGCGCATCTTCTGCAAGGCCGACGAGGGCTTCAGCGCCACCGTCCGCAACGGCACC GTCGTCCTCGCACCTAGCAACCCCCGTGACGAGTACCAGCACTGGTTCAAGGACATGAGG CACAGCAACCGCATCAAGGACGAGGAAGGCTACCCGGCCTTCGCCCTCATCAACAAGGTG ACAGGCGAGGCCCTCAAGCACTCCCAAGGCGAGGGCCACCCTGTGAAGCTGGTGCCATAC AACCCCAACTACCAGGACGAGTCGGTGTTGTGGACTGAGAGCCGCGACGTGGGCGCCGGC TTCAGGTGCATCCGCATGGTGAACAACATCTACCTCAACTTCGACGCTCTCCACGGCGAC AAGGAGCACGGCGGCGTGCGCGACGGCACCTCCCTCGTGCTGTGGAAGTGGTGCGAGGGA GACAACCAGCGCTGGAAGATCCTCCCCTGGTAAACGTGTCATGCTGCTGAAGCTGCATTG ATCGCCACCGGGACACGGAGTTGGTAGAGATCAGCCTGTGATCTGTTGCCGTGTCGGTAG AATAAAAGTCGTGTGCGGTCGGTGGTGGTGATGCGTCCGTGAGTTTGTGTGTTTAGTTTC TGTCCTGTCGTTGTGTCCTGCTAATGCGAGTGTAAGCATTTGGCACCTGTGCTTGTTTTT CAGACCATGGATCCGTGATGAGAACCTCTGTACCGTGGCGTCATCCTTGCCTCTATGCGA ATGGTATTTACTGTCTATCTAAAAAAAAAAAAAAAAAATTTTTGGAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_5950.1 | 1451 | 0.0 | 1 - 1322 | 99 | 1321 / 1322 | None | ABC01244 ABC01246 ABC01247 ABC01249 ABC31028 ABC50075 |
| MLOC_5950.2 | 941 | 0.0 | 1 - 654 | 91 | 597 / 654 | None | ABC01244 ABC01246 ABC01247 ABC01249 ABC31028 ABC50075 |
| AK253026.1 | 1501 | 0.0 | 125 - 1105 | 84 | 820 / 982 | CUST_35768_PI390587928 CUST_20888_PI390587928 CUST_40942_PI390587928 CUST_30441_PI390587928 CUST_16514_PI390587928 | ABC01244 ABC01246 ABC01247 ABC01249 ABC31028 ABC48413 ABC48525 |
| MLOC_59149.1 | 1848 | 0.0 | 468 - 1446 | 83 | 819 / 982 | CUST_4628_PI390587928 CUST_35768_PI390587928 CUST_20888_PI390587928 CUST_30441_PI390587928 CUST_40942_PI390587928 CUST_16514_PI390587928 | ABC01244 ABC01246 ABC01247 ABC01249 ABC48413 ABC48525 |
| AK357931 | 1737 | 2e-172 | 125 - 857 | 82 | 603 / 734 | CUST_40942_PI390587928 CUST_16514_PI390587928 CUST_20888_PI390587928 | ABC01244 ABC01247 |
| MLOC_59149.2 | 1755 | 3e-100 | 1138 - 1491 | 85 | 304 / 356 | CUST_35768_PI390587928 CUST_20888_PI390587928 CUST_30441_PI390587928 CUST_40942_PI390587928 CUST_16514_PI390587928 | ABC01244 ABC01246 ABC01247 ABC01249 ABC48413 |
| AK375204 | 1316 | 8e-136 | 231 - 1069 | 78 | 682 / 877 | CUST_11881_PI390587928 CUST_35421_PI390587928 | ABC01247 |
| AK368196 | 909 | 1e-109 | 196 - 594 | 85 | 338 / 399 | CUST_9751_PI390587928 | ABC01244 ABC01246 ABC01247 ABC01249 ABC04185 ABC31028 |
| MLOC_59149.3 | 1292 | 9e-116 | 545 - 953 | 85 | 350 / 411 | CUST_35768_PI390587928 CUST_16514_PI390587928 CUST_30441_PI390587928 CUST_40942_PI390587928 | ABC01244 ABC01246 ABC01247 ABC01249 ABC48413 ABC48525 |
| MLOC_59062.1 | 913 | 1e-109 | 224 - 622 | 85 | 338 / 399 | None | ABC01244 ABC01246 ABC01247 ABC01249 ABC04185 ABC31028 |
| MLOC_55015.1 | 1870 | 4e-114 | 339 - 802 | 83 | 386 / 466 | CUST_3898_PI390587928 | ABC01244 ABC01246 ABC01247 ABC01249 |
| MLOC_55015.2 | 1524 | 1e-113 | 160 - 616 | 83 | 380 / 458 | None | ABC01244 ABC01246 ABC01247 ABC01249 |