barSeed - Barley Seed Development Database

Probe ABC01175

Source Contig ABC01175

barSeed

Links

Affymetrix Source Sequence (760 bp)

>ABC01175 760
TTCTTTTGTGGGAGCACTAGCAACCGCCCGGCCCAATCTGCTACCTCCCGGTCGCCTATA
AAATCATAAACCCTAACGTCTTCGTGCTCCCCCCTCCGCCGCCGCCACCCACGACCAACA
CCGGAGCCGGAGGAAGAGAGGAAGGGAGAAGCCAACAGGTAACGATGGTGTCCGGCTCCG
GTGTGTCCGCGCGTCGCGTGGTGGTGGATGCGCGCCACCACATGCTGGGACGCCTTGCGT
CGATCGTGGCCAAGGAGCTGCTCAACGGGCAGCGCGTGGTGGTGGTTCGGTGCGAGGAGA
TGTGCATCTCCGGCGGGCTGGTCCGTCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGC
GGATGAACACCAAGCCGTCGCACGGTCCCATCCACTTCCGCGCCCCCTCGAAAATTTTCT
GGCGCACCGTGCGCGGCATGATCCCGCACAAGACGCCCCGCGGCGAGGCTGCGCTCGCCA
GGCTGAAGGCGTTCGAGGGCGTCCCGCCGCCTTATGATCGCACCAAGCGTATGGTCATCC
CCGACGCGCTCAAGTACGCGCCTTATCTTTCTCGCTTGCTCCTCTAATGGCGAATTTAAT
TAGTTATGTGGTGATGATCTTTGTGTGACTTATTGTTGGATAGGGTTCTGAGGCTGCAGC
CGGGTCATAAGTACTGCCTTCTCGGCGAGCTTTCCAAGGAGGTCGGGTGGAACTACCATG
AAACTATCAAGGTACATTTTGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_58847.1	900	0.0	302 - 855	100	554 / 554	None	ABC01139 ABC01170 ABC01175
AK376730	1937	0.0	1005 - 1470	100	466 / 466	None	ABC01139 ABC01170 ABC01175 ABC01985 ABC01988 ABC31854 ABC34765
MLOC_59942.1	947	3e-122	352 - 742	87	340 / 391	None	ABC01139 ABC01170 ABC01175 ABC31708 ABC36971 ABC48480
AK361195	1082	2e-120	68 - 458	87	339 / 391	CUST_9985_PI390587928 CUST_35102_PI390587928 CUST_28990_PI390587928	ABC01139 ABC01170 ABC01175 ABC31708 ABC36971 ABC48480