barSeed - Barley Seed Development Database

Probe ABC00642

Source Contig ABC00642

barSeed

Links

Affymetrix Source Sequence (1252 bp)

>ABC00642 1252
CCGGCCGCCTCCTCGCCGCCCCTCTCCTCCTCCTCGTGCTCCTCCAGCTCCCGGCGCCGT
TGCAGGTGTCCGCGTACCCGCTCACGGCGGTACACTCTGGTCGGTGCCCGAGGCCGGAGG
AGAGGCCGCCGCCGTTCCTCCAGGGGCTCCGGGGAACCTGCCGCACCTCGACGGAGGGAC
AGCTGGCCAAGGAGGTTAATGGGGAGGAACTTATCAGAGAATTGGGTGGAAAGGAGTACA
CTGCTGTCCTCTTCTATGCATCATGGTGCCCTTTCTCTCATAGAATGAGACCAATCTTCG
ACGATCTTAGCTCAATGTATCCACATATTAAGCACTTGGCTGTAGAACAGTCCAACGTGA
TGCCAACAGTTTTATCAAGATATGGTGTCCGCAGCCTTCCTTCTATACTAATAGCTCATG
AGTCATATGCGTTCTGGCCTCTTGTTGCTAAAGATCTCAACTCACTGGTCAACTTTTACT
CTGCTGTTACTGGACAAGAACCAGTTGCATATCTTGGTCCGCGGAAGTGGAACACAACCG
GAAGAAGCACACAGTATGCGAAGCTTTGGAATGGTTCAGTCAGCGAATCAGTGAAGAGCG
AGCCCTACCTAGCATTCAGCATCCTCTTTATTTGCCTAAGGATATTTTTGTTCTTCTTCC
CAAAGTTCTTCGCCTGCATCAAAGGCTTGTGGACCCAATACTTTCGGCACGCCAACTTTG
GAGTGCTTGCCAAATTGACCCAGCTGCTCGAATGTGTGCCCCATGCCGTGGATGTAAGGA
AGTTGTGGAGCAAATGGAGGCTCATGGTTGGAGCCATAAACACGAGAGTCTGGGCATCAT
CTCTAGCTTCTGTGTCTCTTGGTGGGCAATCTTCTCCCCGAGCTGCTAGGTTGGATTGAT
GGTTTGGACTTTAACATTGAGCGGGAGAGCATGCGGGCTGTTTGAATTGCGCTGGATGTG
GAAGCTCCTGTGACTCACATGAAAATGTAGTGAAACATCTTGTTTGTAGCATGTAAATCT
TAGGGATACTGCTGAGCCTGTGTAGATCACACTGTAACATTAATCATGAGTACCCATTGT
CATAGTTTTGAGCAACTGGGCACACAGCATAAGCCTTGTACTATTTTTCACATGTAATCT
GCAATTGCAGTATGACATTTCGACCTATGTTTCCATGTAGTACCATCTGTCTTCTGGCTT
CAGCTATAAAGAGCCATTGCAAGTTTTGTCAACTCTGACATTGCTTTGGGTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_58105.2	5572	0.0	89 - 1292	99	1202 / 1204	CUST_23903_PI390587928 CUST_13856_PI390587928 CUST_9615_PI390587928	ABC00642 ABC03659 ABC09936
MLOC_58104.1	1181	0.0	74 - 1181	99	1107 / 1108	None	ABC00642
AK366862	2230	0.0	74 - 1111	100	1038 / 1038	CUST_22277_PI390587928	ABC00642 ABC10264
MLOC_58105.1	6608	1e-59	1809 - 1934	100	126 / 126	CUST_23903_PI390587928 CUST_13856_PI390587928	ABC00642 ABC03659 ABC09936