barSeed - Barley Seed Development Database

Probe ABC00132

Source Contig ABC00132

barSeed

Links

Affymetrix Source Sequence (1212 bp)

>ABC00132 1212
GGCCCCGAAGAAGCCACCAGCCTCCTCCTCCCTCGCCGCCGCCCGCCGAGGTTGGTCGCC
GGACGCCATGGCTCCCACCAAGAAGTCGAAGAAGAGCACGGAGAACATCAACAACAAGCT
GCAGCTGGTGATGAAGAGCGGCAAGTACACCCTCGGCTACAAGACCGTCCTCAAGACGCT
CCGGAGCTCCAAGGGCAAGTTGATTATCCTTGCAAACAACTGCCCTCCACTCAGGAAGTC
TGAGATCGAGTACTATGCTATGCTCGCCAAGATCAGTGTTCATCACTTCCATGGAAACAA
TGTGGATCTTGGAACTGCCTGCGGCAAGTACTACAGGGTGTGCTGTTTGAGCATCCTTGA
CCCTGGTGACTCGGACATCATCACCACCGTTCCTCAGTGAAGACAACCTTACCTATCCTA
GTCTTAAGACGATGTAGCGTGGAGAGTCATGCTGGCCGTCTCTTGTTATCGAGCCAGAGC
TGCCAATCGCAGTTTCAGACCAAACATGGCTGTTTTTGTAAGGCATTCCTATGGTTTTGT
TTTATGAGATGTTTATTCCTATGTGGTCCTTTTACTGTGTGCGATTGGATGATTAGTGGT
GTTAACATGTTTTGCATGCGTGGAAGCGCTGGTGCAATCTTAGATGAAAGAATTTTTGTT
TTGCCCTGGGCAGCGATTGAGCATACTTGTTCAGGGTTGCCTGGTTGTTTTTGTGAAACG
ATTTCACAGAATATGGCACACTGATATCACTATGGCCAGAGCTGTCGATTGTGAATTTGT
TACTGAGGCTTGTCTCTCTTGAACAAAGAAAGCCTCAAGTGATTAGGTTTCTGATTAGGT
TTTAGATTTGGAGTTGTCGGTGGTAGGGCCCATATCTAGATCCTGGACCATTCTTGCATG
GATACCAAAAAGTCTATAATCAGGAGTACAGATTCAACAGTATGCTTTTTGTAGTGTATA
CTTTCTGTTTTGTTAGTCATATGAATGGTGATAATTTGACCTGAAATATTAGAGGCTAGT
AAACATGGACGGGAGGGGGTATTATCAAAGTTTCAAATGACGCCTTTATCATTGCTTTAG
TGATTGAAGCGGCATGATTCTATTTTAAACTTTAGATATCATACACAAGTACACTCGAGT
ATTACATTATTCGTTAATACTTTATCCCTCTGTACATATATTACGATGGTTTTTTGACAC
TGACAGTATAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376212	673	0.0	10 - 673	100	664 / 664	None	ABC00132 ABC00420 ABC00870 ABC31602
MLOC_56702.1	621	0.0	1 - 532	96	513 / 532	None	ABC00132 ABC00420 ABC00870 ABC31602
MLOC_12065.3	1941	3e-119	108 - 439	90	299 / 332	CUST_23845_PI390587928	ABC00132 ABC00420 ABC00705 ABC00870 ABC29897
MLOC_12065.1	1878	3e-119	108 - 439	90	299 / 332	CUST_23845_PI390587928	ABC00132 ABC00420 ABC00705 ABC00870 ABC29897
MLOC_12065.2	2015	3e-119	108 - 439	90	299 / 332	CUST_23845_PI390587928	ABC00132 ABC00420 ABC00705 ABC00870 ABC29897
MLOC_12066.8	3664	3e-119	3074 - 3405	90	299 / 332	CUST_2655_PI390587928	ABC00132 ABC00420 ABC00705 ABC00870 ABC21293 ABC29897